(17 nodes) Mixed, incl. MnmG, N-terminal domain, and tRNA methyl transferase HUP domain network (Malus baccata)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	C1H46_045469	Uncharacterized protein. (134 aa)
	C1H46_044248	Uncharacterized protein. (357 aa)
	C1H46_040585	Uncharacterized protein. (199 aa)
	C1H46_040586	GIDA_assoc domain-containing protein. (543 aa)
	C1H46_032876	G domain-containing protein. (347 aa)
	C1H46_032875	Uncharacterized protein. (556 aa)
	C1H46_032188	COPIIcoated_ERV domain-containing protein. (125 aa)
	C1H46_032186	Thioredoxin domain-containing protein. (480 aa)
	C1H46_026737	Uncharacterized protein. (195 aa)
	C1H46_026736	Uncharacterized protein. (205 aa)
	C1H46_025011	TrmE-type G domain-containing protein; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. TrmE GTPase family. (559 aa)
	C1H46_022233	Uncharacterized protein. (381 aa)
	C1H46_022235	G domain-containing protein. (231 aa)
	C1H46_022234	Uncharacterized protein. (140 aa)
	C1H46_020856	Uncharacterized protein. (389 aa)
	C1H46_004750	TrmE-type G domain-containing protein; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. TrmE GTPase family. (632 aa)
	C1H46_002680	G domain-containing protein. (350 aa)

Your Current Organism:

Malus baccata

NCBI taxonomy Id: 106549
Other names: M. baccata, Malus baccata (L.) Borkh., shan jing zi

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
C1H46_002680	C1H46_020856	A0A540NKS4	A0A540M4R5	G domain-containing protein.	Uncharacterized protein.	0.887
C1H46_002680	C1H46_026736	A0A540NKS4	A0A540LN91	G domain-containing protein.	Uncharacterized protein.	0.902
C1H46_002680	C1H46_026737	A0A540NKS4	A0A540LMN4	G domain-containing protein.	Uncharacterized protein.	0.902
C1H46_002680	C1H46_032186	A0A540NKS4	A0A540L710	G domain-containing protein.	Thioredoxin domain-containing protein.	0.887
C1H46_002680	C1H46_032188	A0A540NKS4	A0A540L6Z6	G domain-containing protein.	COPIIcoated_ERV domain-containing protein.	0.887
C1H46_002680	C1H46_032875	A0A540NKS4	A0A540L540	G domain-containing protein.	Uncharacterized protein.	0.780
C1H46_002680	C1H46_040585	A0A540NKS4	A0A540KI35	G domain-containing protein.	Uncharacterized protein.	0.902
C1H46_002680	C1H46_040586	A0A540NKS4	A0A540KI55	G domain-containing protein.	GIDA_assoc domain-containing protein.	0.902
C1H46_002680	C1H46_044248	A0A540NKS4	A0A540K7Q8	G domain-containing protein.	Uncharacterized protein.	0.780
C1H46_002680	C1H46_045469	A0A540NKS4	A0A540K450	G domain-containing protein.	Uncharacterized protein.	0.780
C1H46_004750	C1H46_020856	A0A540NF34	A0A540M4R5	TrmE-type G domain-containing protein; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. TrmE GTPase family.	Uncharacterized protein.	0.887
C1H46_004750	C1H46_026736	A0A540NF34	A0A540LN91	TrmE-type G domain-containing protein; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. TrmE GTPase family.	Uncharacterized protein.	0.950
C1H46_004750	C1H46_026737	A0A540NF34	A0A540LMN4	TrmE-type G domain-containing protein; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. TrmE GTPase family.	Uncharacterized protein.	0.951
C1H46_004750	C1H46_032186	A0A540NF34	A0A540L710	TrmE-type G domain-containing protein; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. TrmE GTPase family.	Thioredoxin domain-containing protein.	0.887
C1H46_004750	C1H46_032188	A0A540NF34	A0A540L6Z6	TrmE-type G domain-containing protein; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. TrmE GTPase family.	COPIIcoated_ERV domain-containing protein.	0.887
C1H46_004750	C1H46_032875	A0A540NF34	A0A540L540	TrmE-type G domain-containing protein; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. TrmE GTPase family.	Uncharacterized protein.	0.780
C1H46_004750	C1H46_040585	A0A540NF34	A0A540KI35	TrmE-type G domain-containing protein; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. TrmE GTPase family.	Uncharacterized protein.	0.951
C1H46_004750	C1H46_040586	A0A540NF34	A0A540KI55	TrmE-type G domain-containing protein; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. TrmE GTPase family.	GIDA_assoc domain-containing protein.	0.951
C1H46_004750	C1H46_044248	A0A540NF34	A0A540K7Q8	TrmE-type G domain-containing protein; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. TrmE GTPase family.	Uncharacterized protein.	0.780
C1H46_004750	C1H46_045469	A0A540NF34	A0A540K450	TrmE-type G domain-containing protein; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. TrmE GTPase family.	Uncharacterized protein.	0.780