(40 nodes) Mixed, incl. Plant protein of unknown function, and Plant non-specific lipid-transfer protein/Par allergen network (Malus baccata)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	C1H46_044128	Uncharacterized protein. (963 aa)
	C1H46_043724	Uncharacterized protein. (449 aa)
	C1H46_042211	Uncharacterized protein; Belongs to the plant LTP family. (122 aa)
	C1H46_041004	Uncharacterized protein. (162 aa)
	C1H46_040554	Uncharacterized protein. (204 aa)
	C1H46_040266	Uncharacterized protein. (133 aa)
	C1H46_037759	Uncharacterized protein. (184 aa)
	C1H46_036155	Uncharacterized protein. (453 aa)
	C1H46_035859	AAI domain-containing protein; Belongs to the plant LTP family. (119 aa)
	C1H46_035861	AAI domain-containing protein; Belongs to the plant LTP family. (115 aa)
	C1H46_035783	Uncharacterized protein. (440 aa)
	C1H46_035004	Uncharacterized protein. (231 aa)
	C1H46_033028	Uncharacterized protein; Belongs to the peroxisomal membrane protein PXMP2/4 family. (155 aa)
	C1H46_031607	Uncharacterized protein. (137 aa)
	C1H46_031622	Uncharacterized protein. (259 aa)
	C1H46_031121	LEA_2 domain-containing protein. (174 aa)
	C1H46_031126	Uncharacterized protein. (157 aa)
	C1H46_026097	DUF3700 domain-containing protein. (140 aa)
	C1H46_021105	AAI domain-containing protein; Belongs to the plant LTP family. (120 aa)
	C1H46_021141	Uncharacterized protein. (753 aa)
	C1H46_019924	Usp domain-containing protein. (197 aa)
	C1H46_019679	Uncharacterized protein. (142 aa)
	C1H46_018054	Uncharacterized protein. (197 aa)
	C1H46_016102	LEA_2 domain-containing protein. (223 aa)
	C1H46_015017	Uncharacterized protein. (216 aa)
	C1H46_014446	Uncharacterized protein. (446 aa)
	C1H46_014222	Uncharacterized protein. (455 aa)
	C1H46_014326	Gnk2-homologous domain-containing protein. (146 aa)
	C1H46_013663	Uncharacterized protein. (276 aa)
	C1H46_013664	Uncharacterized protein. (219 aa)
	C1H46_012803	Uncharacterized protein. (449 aa)
	C1H46_012196	Uncharacterized protein. (241 aa)
	C1H46_011918	Uncharacterized protein. (261 aa)
	C1H46_009777	Uncharacterized protein. (176 aa)
	C1H46_008504	Uncharacterized protein. (253 aa)
	C1H46_008454	Uncharacterized protein. (198 aa)
	C1H46_006666	Uncharacterized protein. (253 aa)
	C1H46_005832	Usp domain-containing protein. (440 aa)
	C1H46_004123	Uncharacterized protein. (167 aa)
	C1H46_002657	Uncharacterized protein. (330 aa)

Your Current Organism:

Malus baccata

NCBI taxonomy Id: 106549
Other names: M. baccata, Malus baccata (L.) Borkh., shan jing zi

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structured XML interaction data, according to the 'PSI-MI' data standard

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node degree of proteins in your network (given the current score cut-off)

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a flat-file format describing the coordinates and colors of nodes in the network

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
C1H46_002657	C1H46_004123	A0A540NLB5	A0A540NGX4	Uncharacterized protein.	Uncharacterized protein.	0.517
C1H46_002657	C1H46_005832	A0A540NLB5	A0A540NBW1	Uncharacterized protein.	Usp domain-containing protein.	0.514
C1H46_002657	C1H46_006666	A0A540NLB5	A0A540NAX1	Uncharacterized protein.	Uncharacterized protein.	0.461
C1H46_002657	C1H46_008454	A0A540NLB5	A0A540N607	Uncharacterized protein.	Uncharacterized protein.	0.447
C1H46_002657	C1H46_009777	A0A540NLB5	A0A540N0P2	Uncharacterized protein.	Uncharacterized protein.	0.473
C1H46_002657	C1H46_011918	A0A540NLB5	A0A540MVY0	Uncharacterized protein.	Uncharacterized protein.	0.526
C1H46_002657	C1H46_012196	A0A540NLB5	A0A540MTS0	Uncharacterized protein.	Uncharacterized protein.	0.498
C1H46_002657	C1H46_012803	A0A540NLB5	A0A540MTM7	Uncharacterized protein.	Uncharacterized protein.	0.529
C1H46_002657	C1H46_014326	A0A540NLB5	A0A540MPC1	Uncharacterized protein.	Gnk2-homologous domain-containing protein.	0.511
C1H46_002657	C1H46_014446	A0A540NLB5	A0A540MNY6	Uncharacterized protein.	Uncharacterized protein.	0.534
C1H46_002657	C1H46_015017	A0A540NLB5	A0A540MLV0	Uncharacterized protein.	Uncharacterized protein.	0.572
C1H46_002657	C1H46_016102	A0A540NLB5	A0A540MHQ8	Uncharacterized protein.	LEA_2 domain-containing protein.	0.465
C1H46_002657	C1H46_018054	A0A540NLB5	A0A540MC60	Uncharacterized protein.	Uncharacterized protein.	0.505
C1H46_002657	C1H46_019924	A0A540NLB5	A0A540M6Q9	Uncharacterized protein.	Usp domain-containing protein.	0.422
C1H46_002657	C1H46_021105	A0A540NLB5	A0A540M3G9	Uncharacterized protein.	AAI domain-containing protein; Belongs to the plant LTP family.	0.411
C1H46_002657	C1H46_021141	A0A540NLB5	A0A540M3H8	Uncharacterized protein.	Uncharacterized protein.	0.414
C1H46_002657	C1H46_031121	A0A540NLB5	A0A540LA16	Uncharacterized protein.	LEA_2 domain-containing protein.	0.438
C1H46_002657	C1H46_031622	A0A540NLB5	A0A540L964	Uncharacterized protein.	Uncharacterized protein.	0.491
C1H46_002657	C1H46_033028	A0A540NLB5	A0A540L4N6	Uncharacterized protein.	Uncharacterized protein; Belongs to the peroxisomal membrane protein PXMP2/4 family.	0.474
C1H46_002657	C1H46_035004	A0A540NLB5	A0A540KZL6	Uncharacterized protein.	Uncharacterized protein.	0.469