(6 nodes) U4/U6.U5 small nuclear ribonucleoprotein 27kDa protein, and USP39 network (Malus baccata)

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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second shell of interactors

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proteins of unknown 3D structure

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a 3D structure is known or predicted

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Known Interactions

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experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

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Others

textmining

co-expression

protein homology

Your Input:
	C1H46_040046	Uncharacterized protein. (560 aa)
	C1H46_027726	USP domain-containing protein. (676 aa)
	C1H46_021958	Protein kinase domain-containing protein. (1018 aa)
	C1H46_019449	SNRNP27 domain-containing protein. (176 aa)
	C1H46_014085	Uncharacterized protein. (278 aa)
	C1H46_008612	SNRNP27 domain-containing protein. (203 aa)

Your Current Organism:

Malus baccata

NCBI taxonomy Id: 106549
Other names: M. baccata, Malus baccata (L.) Borkh., shan jing zi

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
C1H46_008612	C1H46_014085	A0A540N5G6	A0A540MNI1	SNRNP27 domain-containing protein.	Uncharacterized protein.	0.871
C1H46_008612	C1H46_021958	A0A540N5G6	A0A540M0X6	SNRNP27 domain-containing protein.	Protein kinase domain-containing protein.	0.709
C1H46_008612	C1H46_027726	A0A540N5G6	A0A540LJR6	SNRNP27 domain-containing protein.	USP domain-containing protein.	0.975
C1H46_008612	C1H46_040046	A0A540N5G6	A0A540KJN5	SNRNP27 domain-containing protein.	Uncharacterized protein.	0.975
C1H46_014085	C1H46_008612	A0A540MNI1	A0A540N5G6	Uncharacterized protein.	SNRNP27 domain-containing protein.	0.871
C1H46_014085	C1H46_019449	A0A540MNI1	A0A540M871	Uncharacterized protein.	SNRNP27 domain-containing protein.	0.871
C1H46_014085	C1H46_021958	A0A540MNI1	A0A540M0X6	Uncharacterized protein.	Protein kinase domain-containing protein.	0.661
C1H46_014085	C1H46_027726	A0A540MNI1	A0A540LJR6	Uncharacterized protein.	USP domain-containing protein.	0.873
C1H46_014085	C1H46_040046	A0A540MNI1	A0A540KJN5	Uncharacterized protein.	Uncharacterized protein.	0.873
C1H46_019449	C1H46_014085	A0A540M871	A0A540MNI1	SNRNP27 domain-containing protein.	Uncharacterized protein.	0.871
C1H46_019449	C1H46_021958	A0A540M871	A0A540M0X6	SNRNP27 domain-containing protein.	Protein kinase domain-containing protein.	0.709
C1H46_019449	C1H46_027726	A0A540M871	A0A540LJR6	SNRNP27 domain-containing protein.	USP domain-containing protein.	0.975
C1H46_019449	C1H46_040046	A0A540M871	A0A540KJN5	SNRNP27 domain-containing protein.	Uncharacterized protein.	0.975
C1H46_021958	C1H46_008612	A0A540M0X6	A0A540N5G6	Protein kinase domain-containing protein.	SNRNP27 domain-containing protein.	0.709
C1H46_021958	C1H46_014085	A0A540M0X6	A0A540MNI1	Protein kinase domain-containing protein.	Uncharacterized protein.	0.661
C1H46_021958	C1H46_019449	A0A540M0X6	A0A540M871	Protein kinase domain-containing protein.	SNRNP27 domain-containing protein.	0.709
C1H46_021958	C1H46_027726	A0A540M0X6	A0A540LJR6	Protein kinase domain-containing protein.	USP domain-containing protein.	0.893
C1H46_021958	C1H46_040046	A0A540M0X6	A0A540KJN5	Protein kinase domain-containing protein.	Uncharacterized protein.	0.893
C1H46_027726	C1H46_008612	A0A540LJR6	A0A540N5G6	USP domain-containing protein.	SNRNP27 domain-containing protein.	0.975
C1H46_027726	C1H46_014085	A0A540LJR6	A0A540MNI1	USP domain-containing protein.	Uncharacterized protein.	0.873