(15 nodes) Mixed, incl. Microfibrillar-associated protein 1, and U4/U6.U5 small nuclear ribonucleoprotein component Snu23 network (Malus baccata)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	C1H46_045783	Uncharacterized protein. (137 aa)
	C1H46_044456	Matrin-type domain-containing protein. (252 aa)
	C1H46_044069	PRP38_assoc domain-containing protein. (376 aa)
	C1H46_042795	MFAP1 domain-containing protein. (428 aa)
	C1H46_041384	Uncharacterized protein. (296 aa)
	C1H46_039577	U1-type domain-containing protein. (203 aa)
	C1H46_032397	PRP38_assoc domain-containing protein. (373 aa)
	C1H46_031683	Uncharacterized protein. (473 aa)
	C1H46_028856	Uncharacterized protein. (940 aa)
	C1H46_024022	Uncharacterized protein. (295 aa)
	C1H46_022592	U1-type domain-containing protein. (202 aa)
	C1H46_017811	Uncharacterized protein. (523 aa)
	C1H46_015260	MFAP1 domain-containing protein. (307 aa)
	C1H46_009666	Ubiquitin-like domain-containing protein. (73 aa)
	C1H46_005732	Uncharacterized protein. (1083 aa)

Your Current Organism:

Malus baccata

NCBI taxonomy Id: 106549
Other names: M. baccata, Malus baccata (L.) Borkh., shan jing zi

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
C1H46_005732	C1H46_009666	A0A540NDQ7	A0A540N2B3	Uncharacterized protein.	Ubiquitin-like domain-containing protein.	0.886
C1H46_005732	C1H46_015260	A0A540NDQ7	A0A540MK32	Uncharacterized protein.	MFAP1 domain-containing protein.	0.983
C1H46_005732	C1H46_022592	A0A540NDQ7	A0A540LZ29	Uncharacterized protein.	U1-type domain-containing protein.	0.957
C1H46_005732	C1H46_028856	A0A540NDQ7	A0A540LGJ4	Uncharacterized protein.	Uncharacterized protein.	0.957
C1H46_005732	C1H46_032397	A0A540NDQ7	A0A540L6E2	Uncharacterized protein.	PRP38_assoc domain-containing protein.	0.977
C1H46_005732	C1H46_039577	A0A540NDQ7	A0A540KL09	Uncharacterized protein.	U1-type domain-containing protein.	0.957
C1H46_005732	C1H46_041384	A0A540NDQ7	A0A540KGH3	Uncharacterized protein.	Uncharacterized protein.	0.829
C1H46_005732	C1H46_042795	A0A540NDQ7	A0A540KBS6	Uncharacterized protein.	MFAP1 domain-containing protein.	0.983
C1H46_005732	C1H46_044069	A0A540NDQ7	A0A540K844	Uncharacterized protein.	PRP38_assoc domain-containing protein.	0.977
C1H46_005732	C1H46_044456	A0A540NDQ7	A0A540K709	Uncharacterized protein.	Matrin-type domain-containing protein.	0.691
C1H46_005732	C1H46_045783	A0A540NDQ7	A0A540K335	Uncharacterized protein.	Uncharacterized protein.	0.881
C1H46_009666	C1H46_005732	A0A540N2B3	A0A540NDQ7	Ubiquitin-like domain-containing protein.	Uncharacterized protein.	0.886
C1H46_009666	C1H46_015260	A0A540N2B3	A0A540MK32	Ubiquitin-like domain-containing protein.	MFAP1 domain-containing protein.	0.982
C1H46_009666	C1H46_017811	A0A540N2B3	A0A540MCU6	Ubiquitin-like domain-containing protein.	Uncharacterized protein.	0.919
C1H46_009666	C1H46_022592	A0A540N2B3	A0A540LZ29	Ubiquitin-like domain-containing protein.	U1-type domain-containing protein.	0.911
C1H46_009666	C1H46_024022	A0A540N2B3	A0A540LV58	Ubiquitin-like domain-containing protein.	Uncharacterized protein.	0.886
C1H46_009666	C1H46_028856	A0A540N2B3	A0A540LGJ4	Ubiquitin-like domain-containing protein.	Uncharacterized protein.	0.911
C1H46_009666	C1H46_031683	A0A540N2B3	A0A540L8E5	Ubiquitin-like domain-containing protein.	Uncharacterized protein.	0.954
C1H46_009666	C1H46_032397	A0A540N2B3	A0A540L6E2	Ubiquitin-like domain-containing protein.	PRP38_assoc domain-containing protein.	0.981
C1H46_009666	C1H46_039577	A0A540N2B3	A0A540KL09	Ubiquitin-like domain-containing protein.	U1-type domain-containing protein.	0.911