(94 nodes) Prp19 complex, and mRNA Splicing - Major Pathway network (Malus baccata)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	C1H46_045444	Peptidyl-prolyl cis-trans isomerase; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family. (150 aa)
	C1H46_045007	Slu7 domain-containing protein. (431 aa)
	C1H46_044598	Uncharacterized protein. (450 aa)
	C1H46_044599	Uncharacterized protein. (577 aa)
	C1H46_044239	Uncharacterized protein. (106 aa)
	C1H46_043455	PPIase cyclophilin-type domain-containing protein. (497 aa)
	C1H46_042477	WD_REPEATS_REGION domain-containing protein. (184 aa)
	C1H46_042555	WD_REPEATS_REGION domain-containing protein. (1090 aa)
	C1H46_041453	Uncharacterized protein. (258 aa)
	C1H46_041316	WD_REPEATS_REGION domain-containing protein. (227 aa)
	C1H46_040427	Uncharacterized protein. (269 aa)
	C1H46_029787	Uncharacterized protein. (487 aa)
	C1H46_039201	Uncharacterized protein. (145 aa)
	C1H46_038606	WD_REPEATS_REGION domain-containing protein. (353 aa)
	C1H46_037342	Uncharacterized protein. (705 aa)
	C1H46_037136	TPR_REGION domain-containing protein. (879 aa)
	C1H46_036741	Uncharacterized protein. (145 aa)
	C1H46_036375	Uncharacterized protein. (53 aa)
	C1H46_035892	Uncharacterized protein. (499 aa)
	C1H46_035893	Uncharacterized protein. (297 aa)
	C1H46_035473	SKIP_SNW domain-containing protein. (608 aa)
	C1H46_035475	SKIP_SNW domain-containing protein. (491 aa)
	C1H46_035474	Uncharacterized protein. (464 aa)
	C1H46_034373	WD_REPEATS_REGION domain-containing protein. (476 aa)
	C1H46_033068	WD_REPEATS_REGION domain-containing protein. (591 aa)
	C1H46_032808	Uncharacterized protein. (464 aa)
	C1H46_032809	Uncharacterized protein. (493 aa)
	C1H46_032414	MI domain-containing protein. (600 aa)
	C1H46_032169	Uncharacterized protein. (67 aa)
	C1H46_031187	Uncharacterized protein. (95 aa)
	C1H46_030834	RRM domain-containing protein. (130 aa)
	C1H46_030654	Cwf21 domain-containing protein. (748 aa)
	C1H46_030662	Uncharacterized protein. (128 aa)
	C1H46_029788	Uncharacterized protein. (145 aa)
	C1H46_028500	SFM domain-containing protein. (372 aa)
	C1H46_027565	WD_REPEATS_REGION domain-containing protein. (165 aa)
	C1H46_027305	Peptidyl-prolyl cis-trans isomerase; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family. (140 aa)
	C1H46_026609	Slu7 domain-containing protein. (564 aa)
	C1H46_026180	TPR_REGION domain-containing protein. (774 aa)
	C1H46_025892	Uncharacterized protein. (1523 aa)
	C1H46_025812	PARP catalytic domain-containing protein. (510 aa)
	C1H46_025580	Uncharacterized protein. (262 aa)
	C1H46_025453	Uncharacterized protein. (1215 aa)
	C1H46_025182	RRM domain-containing protein. (172 aa)
	C1H46_024942	Peptidyl-prolyl cis-trans isomerase; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family. (110 aa)
	C1H46_024591	MI domain-containing protein. (796 aa)
	C1H46_024513	WD_REPEATS_REGION domain-containing protein. (480 aa)
	C1H46_023708	Uncharacterized protein. (258 aa)
	C1H46_023399	Uncharacterized protein. (137 aa)
	C1H46_022735	Uncharacterized protein. (468 aa)
	C1H46_021384	Uncharacterized protein. (202 aa)
	C1H46_021385	Uncharacterized protein. (978 aa)
	C1H46_021382	Myb_Cef domain-containing protein. (180 aa)
	C1H46_020770	Uncharacterized protein. (633 aa)
	C1H46_020771	Uncharacterized protein. (262 aa)
	C1H46_020613	Ubiquitin-like domain-containing protein. (467 aa)
	C1H46_020620	Uncharacterized protein. (316 aa)
	C1H46_019586	Uncharacterized protein. (261 aa)
	C1H46_018969	Uncharacterized protein. (185 aa)
	C1H46_018724	Uncharacterized protein. (100 aa)
	C1H46_018116	Uncharacterized protein. (292 aa)
	C1H46_017640	Uncharacterized protein. (1297 aa)
	C1H46_017050	Uncharacterized protein. (498 aa)
	C1H46_015239	Uncharacterized protein. (928 aa)
	C1H46_014285	DUF1716 domain-containing protein. (522 aa)
	C1H46_013055	Uncharacterized protein. (316 aa)
	C1H46_012784	Nkap_C domain-containing protein. (73 aa)
	C1H46_012833	Uncharacterized protein. (807 aa)
	C1H46_012233	Uncharacterized protein. (978 aa)
	C1H46_012038	SKIP_SNW domain-containing protein. (609 aa)
	C1H46_010901	Cir_N domain-containing protein. (526 aa)
	C1H46_010780	Uncharacterized protein. (109 aa)
	C1H46_010129	Uncharacterized protein. (145 aa)
	C1H46_010024	Uncharacterized protein. (1591 aa)
	C1H46_010023	Uncharacterized protein. (94 aa)
	C1H46_009197	Uncharacterized protein. (336 aa)
	C1H46_009191	Uncharacterized protein. (697 aa)
	C1H46_009194	Uncharacterized protein. (134 aa)
	C1H46_008957	Uncharacterized protein. (252 aa)
	C1H46_009282	Uncharacterized protein. (291 aa)
	C1H46_007845	WD_REPEATS_REGION domain-containing protein. (547 aa)
	C1H46_006995	MI domain-containing protein. (549 aa)
	C1H46_006954	Uncharacterized protein. (1721 aa)
	C1H46_006023	Uncharacterized protein. (530 aa)
	C1H46_005906	Uncharacterized protein. (705 aa)
	C1H46_005608	Uncharacterized protein. (183 aa)
	C1H46_004795	Uncharacterized protein. (521 aa)
	C1H46_004419	Uncharacterized protein. (1129 aa)
	C1H46_003692	Uncharacterized protein. (72 aa)
	C1H46_003153	TPR_REGION domain-containing protein. (138 aa)
	C1H46_000675	Uncharacterized protein. (337 aa)
	C1H46_000794	Slu7 domain-containing protein. (540 aa)
	C1H46_001020	Ubiquitin-like domain-containing protein. (472 aa)
	C1H46_000103	Uncharacterized protein. (1574 aa)

Your Current Organism:

Malus baccata

NCBI taxonomy Id: 106549
Other names: M. baccata, Malus baccata (L.) Borkh., shan jing zi

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
C1H46_000103	C1H46_000675	A0A540NT22	A0A540NRJ9	Uncharacterized protein.	Uncharacterized protein.	0.737
C1H46_000103	C1H46_000794	A0A540NT22	A0A540NRX4	Uncharacterized protein.	Slu7 domain-containing protein.	0.822
C1H46_000103	C1H46_001020	A0A540NT22	A0A540NS46	Uncharacterized protein.	Ubiquitin-like domain-containing protein.	0.983
C1H46_000103	C1H46_003153	A0A540NT22	A0A540NJC3	Uncharacterized protein.	TPR_REGION domain-containing protein.	0.530
C1H46_000103	C1H46_003692	A0A540NT22	A0A540NIF5	Uncharacterized protein.	Uncharacterized protein.	0.770
C1H46_000103	C1H46_004419	A0A540NT22	A0A540NG26	Uncharacterized protein.	Uncharacterized protein.	0.729
C1H46_000103	C1H46_004795	A0A540NT22	A0A540NF02	Uncharacterized protein.	Uncharacterized protein.	0.685
C1H46_000103	C1H46_005608	A0A540NT22	A0A540NE21	Uncharacterized protein.	Uncharacterized protein.	0.582
C1H46_000103	C1H46_005906	A0A540NT22	A0A540NBL9	Uncharacterized protein.	Uncharacterized protein.	0.530
C1H46_000103	C1H46_006023	A0A540NT22	A0A540NBH2	Uncharacterized protein.	Uncharacterized protein.	0.685
C1H46_000103	C1H46_006954	A0A540NT22	A0A540N8V3	Uncharacterized protein.	Uncharacterized protein.	0.757
C1H46_000103	C1H46_006995	A0A540NT22	A0A540N8G2	Uncharacterized protein.	MI domain-containing protein.	0.833
C1H46_000103	C1H46_007845	A0A540NT22	A0A540N7U0	Uncharacterized protein.	WD_REPEATS_REGION domain-containing protein.	0.667
C1H46_000103	C1H46_008957	A0A540NT22	A0A540N2S7	Uncharacterized protein.	Uncharacterized protein.	0.752
C1H46_000103	C1H46_009191	A0A540NT22	A0A540N2E9	Uncharacterized protein.	Uncharacterized protein.	0.530
C1H46_000103	C1H46_009194	A0A540NT22	A0A540N2F3	Uncharacterized protein.	Uncharacterized protein.	0.530
C1H46_000103	C1H46_009197	A0A540NT22	A0A540N2C9	Uncharacterized protein.	Uncharacterized protein.	0.530
C1H46_000103	C1H46_009282	A0A540NT22	A0A540N3P2	Uncharacterized protein.	Uncharacterized protein.	0.747
C1H46_000103	C1H46_010129	A0A540NT22	A0A540N000	Uncharacterized protein.	Uncharacterized protein.	0.450
C1H46_000103	C1H46_010780	A0A540NT22	A0A540MY03	Uncharacterized protein.	Uncharacterized protein.	0.736