(10 nodes) Mixed, incl. Pre-mRNA-splicing factor SLU7 domain, and Positive regulation of protein-containing complex assembly network (Malus baccata)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	C1H46_033068	WD_REPEATS_REGION domain-containing protein. (591 aa)
	C1H46_032414	MI domain-containing protein. (600 aa)
	C1H46_028500	SFM domain-containing protein. (372 aa)
	C1H46_026609	Slu7 domain-containing protein. (564 aa)
	C1H46_017640	Uncharacterized protein. (1297 aa)
	C1H46_010901	Cir_N domain-containing protein. (526 aa)
	C1H46_004419	Uncharacterized protein. (1129 aa)
	C1H46_003692	Uncharacterized protein. (72 aa)
	C1H46_000675	Uncharacterized protein. (337 aa)
	C1H46_000794	Slu7 domain-containing protein. (540 aa)

Your Current Organism:

Malus baccata

NCBI taxonomy Id: 106549
Other names: M. baccata, Malus baccata (L.) Borkh., shan jing zi

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
C1H46_000675	C1H46_000794	A0A540NRJ9	A0A540NRX4	Uncharacterized protein.	Slu7 domain-containing protein.	0.859
C1H46_000675	C1H46_003692	A0A540NRJ9	A0A540NIF5	Uncharacterized protein.	Uncharacterized protein.	0.967
C1H46_000675	C1H46_004419	A0A540NRJ9	A0A540NG26	Uncharacterized protein.	Uncharacterized protein.	0.975
C1H46_000675	C1H46_010901	A0A540NRJ9	A0A540MXR8	Uncharacterized protein.	Cir_N domain-containing protein.	0.991
C1H46_000675	C1H46_017640	A0A540NRJ9	A0A540MDC1	Uncharacterized protein.	Uncharacterized protein.	0.975
C1H46_000675	C1H46_026609	A0A540NRJ9	A0A540LND9	Uncharacterized protein.	Slu7 domain-containing protein.	0.859
C1H46_000675	C1H46_028500	A0A540NRJ9	A0A540LHM6	Uncharacterized protein.	SFM domain-containing protein.	0.947
C1H46_000675	C1H46_032414	A0A540NRJ9	A0A540L6C2	Uncharacterized protein.	MI domain-containing protein.	0.965
C1H46_000675	C1H46_033068	A0A540NRJ9	A0A540L4E5	Uncharacterized protein.	WD_REPEATS_REGION domain-containing protein.	0.950
C1H46_000794	C1H46_000675	A0A540NRX4	A0A540NRJ9	Slu7 domain-containing protein.	Uncharacterized protein.	0.859
C1H46_000794	C1H46_003692	A0A540NRX4	A0A540NIF5	Slu7 domain-containing protein.	Uncharacterized protein.	0.961
C1H46_000794	C1H46_004419	A0A540NRX4	A0A540NG26	Slu7 domain-containing protein.	Uncharacterized protein.	0.962
C1H46_000794	C1H46_010901	A0A540NRX4	A0A540MXR8	Slu7 domain-containing protein.	Cir_N domain-containing protein.	0.955
C1H46_000794	C1H46_017640	A0A540NRX4	A0A540MDC1	Slu7 domain-containing protein.	Uncharacterized protein.	0.962
C1H46_000794	C1H46_026609	A0A540NRX4	A0A540LND9	Slu7 domain-containing protein.	Slu7 domain-containing protein.	0.937
C1H46_000794	C1H46_028500	A0A540NRX4	A0A540LHM6	Slu7 domain-containing protein.	SFM domain-containing protein.	0.986
C1H46_000794	C1H46_032414	A0A540NRX4	A0A540L6C2	Slu7 domain-containing protein.	MI domain-containing protein.	0.960
C1H46_000794	C1H46_033068	A0A540NRX4	A0A540L4E5	Slu7 domain-containing protein.	WD_REPEATS_REGION domain-containing protein.	0.945
C1H46_003692	C1H46_000675	A0A540NIF5	A0A540NRJ9	Uncharacterized protein.	Uncharacterized protein.	0.967
C1H46_003692	C1H46_000794	A0A540NIF5	A0A540NRX4	Uncharacterized protein.	Slu7 domain-containing protein.	0.961