(6 nodes) Mixed, incl. Protein SPIRAL1-like, and Intron splicing facilitator CRS1/CFM2/CFM3 network (Malus baccata)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	C1H46_042081	Uncharacterized protein. (119 aa)
	C1H46_036153	Uncharacterized protein. (783 aa)
	C1H46_031946	Uncharacterized protein. (299 aa)
	C1H46_029090	Uncharacterized protein. (86 aa)
	C1H46_026179	DUF4408 domain-containing protein. (363 aa)
	C1H46_011748	HTH myb-type domain-containing protein. (355 aa)

Your Current Organism:

Malus baccata

NCBI taxonomy Id: 106549
Other names: M. baccata, Malus baccata (L.) Borkh., shan jing zi

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structured XML interaction data, according to the 'PSI-MI' data standard

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a flat-file format describing the coordinates and colors of nodes in the network

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
C1H46_011748	C1H46_036153	A0A540MV67	A0A540KVQ0	HTH myb-type domain-containing protein.	Uncharacterized protein.	0.475
C1H46_011748	C1H46_042081	A0A540MV67	A0A540KE32	HTH myb-type domain-containing protein.	Uncharacterized protein.	0.412
C1H46_026179	C1H46_029090	A0A540LPH1	A0A540LFU9	DUF4408 domain-containing protein.	Uncharacterized protein.	0.416
C1H46_026179	C1H46_031946	A0A540LPH1	A0A540L7T4	DUF4408 domain-containing protein.	Uncharacterized protein.	0.416
C1H46_026179	C1H46_036153	A0A540LPH1	A0A540KVQ0	DUF4408 domain-containing protein.	Uncharacterized protein.	0.626
C1H46_029090	C1H46_026179	A0A540LFU9	A0A540LPH1	Uncharacterized protein.	DUF4408 domain-containing protein.	0.416
C1H46_029090	C1H46_036153	A0A540LFU9	A0A540KVQ0	Uncharacterized protein.	Uncharacterized protein.	0.497
C1H46_029090	C1H46_042081	A0A540LFU9	A0A540KE32	Uncharacterized protein.	Uncharacterized protein.	0.421
C1H46_031946	C1H46_026179	A0A540L7T4	A0A540LPH1	Uncharacterized protein.	DUF4408 domain-containing protein.	0.416
C1H46_031946	C1H46_036153	A0A540L7T4	A0A540KVQ0	Uncharacterized protein.	Uncharacterized protein.	0.497
C1H46_031946	C1H46_042081	A0A540L7T4	A0A540KE32	Uncharacterized protein.	Uncharacterized protein.	0.421
C1H46_036153	C1H46_011748	A0A540KVQ0	A0A540MV67	Uncharacterized protein.	HTH myb-type domain-containing protein.	0.475
C1H46_036153	C1H46_026179	A0A540KVQ0	A0A540LPH1	Uncharacterized protein.	DUF4408 domain-containing protein.	0.626
C1H46_036153	C1H46_029090	A0A540KVQ0	A0A540LFU9	Uncharacterized protein.	Uncharacterized protein.	0.497
C1H46_036153	C1H46_031946	A0A540KVQ0	A0A540L7T4	Uncharacterized protein.	Uncharacterized protein.	0.497
C1H46_036153	C1H46_042081	A0A540KVQ0	A0A540KE32	Uncharacterized protein.	Uncharacterized protein.	0.490
C1H46_042081	C1H46_011748	A0A540KE32	A0A540MV67	Uncharacterized protein.	HTH myb-type domain-containing protein.	0.412
C1H46_042081	C1H46_029090	A0A540KE32	A0A540LFU9	Uncharacterized protein.	Uncharacterized protein.	0.421
C1H46_042081	C1H46_031946	A0A540KE32	A0A540L7T4	Uncharacterized protein.	Uncharacterized protein.	0.421
C1H46_042081	C1H46_036153	A0A540KE32	A0A540KVQ0	Uncharacterized protein.	Uncharacterized protein.	0.490