(5 nodes) MCAfunc domain, and Xyloglucan metabolic process network (Malus baccata)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	C1H46_041861	Uncharacterized protein. (177 aa)
	C1H46_041381	Uncharacterized protein. (582 aa)
	C1H46_018805	PMR5N domain-containing protein. (330 aa)
	C1H46_005677	Uncharacterized protein. (119 aa)
	C1H46_002905	Uncharacterized protein. (381 aa)

Your Current Organism:

Malus baccata

NCBI taxonomy Id: 106549
Other names: M. baccata, Malus baccata (L.) Borkh., shan jing zi

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
C1H46_002905	C1H46_005677	A0A540NLZ3	A0A540NDL5	Uncharacterized protein.	Uncharacterized protein.	0.520
C1H46_002905	C1H46_018805	A0A540NLZ3	A0A540MA22	Uncharacterized protein.	PMR5N domain-containing protein.	0.492
C1H46_002905	C1H46_041381	A0A540NLZ3	A0A540KFX4	Uncharacterized protein.	Uncharacterized protein.	0.553
C1H46_002905	C1H46_041861	A0A540NLZ3	A0A540KEE5	Uncharacterized protein.	Uncharacterized protein.	0.521
C1H46_005677	C1H46_002905	A0A540NDL5	A0A540NLZ3	Uncharacterized protein.	Uncharacterized protein.	0.520
C1H46_005677	C1H46_018805	A0A540NDL5	A0A540MA22	Uncharacterized protein.	PMR5N domain-containing protein.	0.525
C1H46_005677	C1H46_041381	A0A540NDL5	A0A540KFX4	Uncharacterized protein.	Uncharacterized protein.	0.535
C1H46_005677	C1H46_041861	A0A540NDL5	A0A540KEE5	Uncharacterized protein.	Uncharacterized protein.	0.538
C1H46_018805	C1H46_002905	A0A540MA22	A0A540NLZ3	PMR5N domain-containing protein.	Uncharacterized protein.	0.492
C1H46_018805	C1H46_005677	A0A540MA22	A0A540NDL5	PMR5N domain-containing protein.	Uncharacterized protein.	0.525
C1H46_018805	C1H46_041381	A0A540MA22	A0A540KFX4	PMR5N domain-containing protein.	Uncharacterized protein.	0.496
C1H46_018805	C1H46_041861	A0A540MA22	A0A540KEE5	PMR5N domain-containing protein.	Uncharacterized protein.	0.516
C1H46_041381	C1H46_002905	A0A540KFX4	A0A540NLZ3	Uncharacterized protein.	Uncharacterized protein.	0.553
C1H46_041381	C1H46_005677	A0A540KFX4	A0A540NDL5	Uncharacterized protein.	Uncharacterized protein.	0.535
C1H46_041381	C1H46_018805	A0A540KFX4	A0A540MA22	Uncharacterized protein.	PMR5N domain-containing protein.	0.496
C1H46_041381	C1H46_041861	A0A540KFX4	A0A540KEE5	Uncharacterized protein.	Uncharacterized protein.	0.529
C1H46_041861	C1H46_002905	A0A540KEE5	A0A540NLZ3	Uncharacterized protein.	Uncharacterized protein.	0.521
C1H46_041861	C1H46_005677	A0A540KEE5	A0A540NDL5	Uncharacterized protein.	Uncharacterized protein.	0.538
C1H46_041861	C1H46_018805	A0A540KEE5	A0A540MA22	Uncharacterized protein.	PMR5N domain-containing protein.	0.516
C1H46_041861	C1H46_041381	A0A540KEE5	A0A540KFX4	Uncharacterized protein.	Uncharacterized protein.	0.529