(16 nodes) Mixed, incl. Tristetraprolin (TTP, ZFP36) binds and destabilizes mRNA, and PWI domain network (Malus baccata)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	C1H46_044909	Importin N-terminal domain-containing protein. (344 aa)
	C1H46_044817	RRM domain-containing protein. (414 aa)
	C1H46_043514	Uncharacterized protein. (326 aa)
	C1H46_043515	Uncharacterized protein. (54 aa)
	C1H46_043513	Uncharacterized protein. (103 aa)
	C1H46_038031	Uncharacterized protein. (484 aa)
	C1H46_038034	RRM domain-containing protein. (417 aa)
	C1H46_030698	Uncharacterized protein. (418 aa)
	C1H46_029603	Uncharacterized protein. (433 aa)
	C1H46_029340	RRM domain-containing protein. (715 aa)
	C1H46_023283	Uncharacterized protein. (489 aa)
	C1H46_018095	Importin N-terminal domain-containing protein. (788 aa)
	C1H46_006624	Uncharacterized protein. (482 aa)
	C1H46_006578	Uncharacterized protein. (447 aa)
	C1H46_006626	Uncharacterized protein. (478 aa)
	C1H46_006071	RRM domain-containing protein. (685 aa)

Your Current Organism:

Malus baccata

NCBI taxonomy Id: 106549
Other names: M. baccata, Malus baccata (L.) Borkh., shan jing zi

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
C1H46_006071	C1H46_006624	A0A540NB75	A0A540N9G1	RRM domain-containing protein.	Uncharacterized protein.	0.850
C1H46_006071	C1H46_006626	A0A540NB75	A0A540NAT3	RRM domain-containing protein.	Uncharacterized protein.	0.850
C1H46_006071	C1H46_018095	A0A540NB75	A0A540MD19	RRM domain-containing protein.	Importin N-terminal domain-containing protein.	0.884
C1H46_006071	C1H46_023283	A0A540NB75	A0A540LXF8	RRM domain-containing protein.	Uncharacterized protein.	0.850
C1H46_006071	C1H46_030698	A0A540NB75	A0A540LB94	RRM domain-containing protein.	Uncharacterized protein.	0.850
C1H46_006071	C1H46_038031	A0A540NB75	A0A540KQC8	RRM domain-containing protein.	Uncharacterized protein.	0.850
C1H46_006071	C1H46_038034	A0A540NB75	A0A540KQI6	RRM domain-containing protein.	RRM domain-containing protein.	0.850
C1H46_006071	C1H46_043513	A0A540NB75	A0A540K9R1	RRM domain-containing protein.	Uncharacterized protein.	0.884
C1H46_006071	C1H46_043514	A0A540NB75	A0A540K9P3	RRM domain-containing protein.	Uncharacterized protein.	0.884
C1H46_006071	C1H46_043515	A0A540NB75	A0A540K9P9	RRM domain-containing protein.	Uncharacterized protein.	0.884
C1H46_006071	C1H46_044817	A0A540NB75	A0A540K605	RRM domain-containing protein.	RRM domain-containing protein.	0.850
C1H46_006071	C1H46_044909	A0A540NB75	A0A540K5Q2	RRM domain-containing protein.	Importin N-terminal domain-containing protein.	0.884
C1H46_006578	C1H46_006624	A0A540N9W8	A0A540N9G1	Uncharacterized protein.	Uncharacterized protein.	0.585
C1H46_006578	C1H46_006626	A0A540N9W8	A0A540NAT3	Uncharacterized protein.	Uncharacterized protein.	0.587
C1H46_006578	C1H46_030698	A0A540N9W8	A0A540LB94	Uncharacterized protein.	Uncharacterized protein.	0.578
C1H46_006578	C1H46_038031	A0A540N9W8	A0A540KQC8	Uncharacterized protein.	Uncharacterized protein.	0.585
C1H46_006578	C1H46_038034	A0A540N9W8	A0A540KQI6	Uncharacterized protein.	RRM domain-containing protein.	0.597
C1H46_006624	C1H46_006071	A0A540N9G1	A0A540NB75	Uncharacterized protein.	RRM domain-containing protein.	0.850
C1H46_006624	C1H46_006578	A0A540N9G1	A0A540N9W8	Uncharacterized protein.	Uncharacterized protein.	0.585
C1H46_006624	C1H46_018095	A0A540N9G1	A0A540MD19	Uncharacterized protein.	Importin N-terminal domain-containing protein.	0.669