(12 nodes) Mixed, incl. Casparian strip membrane protein/CASP-like protein, and BTB And C-terminal Kelch network (Malus baccata)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	C1H46_045196	Uncharacterized protein. (132 aa)
	C1H46_035759	CASP-like protein; Belongs to the Casparian strip membrane proteins (CASP) family. (164 aa)
	C1H46_035494	Uncharacterized protein. (203 aa)
	C1H46_032949	Uncharacterized protein. (312 aa)
	C1H46_029170	CASP-like protein; Belongs to the Casparian strip membrane proteins (CASP) family. (164 aa)
	C1H46_028579	HMA domain-containing protein. (159 aa)
	C1H46_019527	A20-type domain-containing protein. (130 aa)
	C1H46_019864	Uncharacterized protein. (312 aa)
	C1H46_010131	BTB domain-containing protein. (963 aa)
	C1H46_010460	F-box domain-containing protein. (326 aa)
	C1H46_009863	C2 domain-containing protein. (179 aa)
	C1H46_006058	Uncharacterized protein. (336 aa)

Your Current Organism:

Malus baccata

NCBI taxonomy Id: 106549
Other names: M. baccata, Malus baccata (L.) Borkh., shan jing zi

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
C1H46_006058	C1H46_009863	A0A540NB54	A0A540N0I7	Uncharacterized protein.	C2 domain-containing protein.	0.482
C1H46_006058	C1H46_010131	A0A540NB54	A0A540MZY7	Uncharacterized protein.	BTB domain-containing protein.	0.410
C1H46_006058	C1H46_019527	A0A540NB54	A0A540M7U3	Uncharacterized protein.	A20-type domain-containing protein.	0.482
C1H46_006058	C1H46_019864	A0A540NB54	A0A540M810	Uncharacterized protein.	Uncharacterized protein.	0.416
C1H46_006058	C1H46_028579	A0A540NB54	A0A540LHQ7	Uncharacterized protein.	HMA domain-containing protein.	0.466
C1H46_006058	C1H46_032949	A0A540NB54	A0A540L4W7	Uncharacterized protein.	Uncharacterized protein.	0.422
C1H46_006058	C1H46_035494	A0A540NB54	A0A540KXT8	Uncharacterized protein.	Uncharacterized protein.	0.510
C1H46_006058	C1H46_035759	A0A540NB54	A0A540KWP5	Uncharacterized protein.	CASP-like protein; Belongs to the Casparian strip membrane proteins (CASP) family.	0.415
C1H46_009863	C1H46_006058	A0A540N0I7	A0A540NB54	C2 domain-containing protein.	Uncharacterized protein.	0.482
C1H46_009863	C1H46_010131	A0A540N0I7	A0A540MZY7	C2 domain-containing protein.	BTB domain-containing protein.	0.453
C1H46_009863	C1H46_019527	A0A540N0I7	A0A540M7U3	C2 domain-containing protein.	A20-type domain-containing protein.	0.503
C1H46_009863	C1H46_019864	A0A540N0I7	A0A540M810	C2 domain-containing protein.	Uncharacterized protein.	0.435
C1H46_009863	C1H46_028579	A0A540N0I7	A0A540LHQ7	C2 domain-containing protein.	HMA domain-containing protein.	0.496
C1H46_009863	C1H46_032949	A0A540N0I7	A0A540L4W7	C2 domain-containing protein.	Uncharacterized protein.	0.437
C1H46_009863	C1H46_035494	A0A540N0I7	A0A540KXT8	C2 domain-containing protein.	Uncharacterized protein.	0.489
C1H46_009863	C1H46_035759	A0A540N0I7	A0A540KWP5	C2 domain-containing protein.	CASP-like protein; Belongs to the Casparian strip membrane proteins (CASP) family.	0.403
C1H46_009863	C1H46_045196	A0A540N0I7	A0A540K4W7	C2 domain-containing protein.	Uncharacterized protein.	0.405
C1H46_010131	C1H46_006058	A0A540MZY7	A0A540NB54	BTB domain-containing protein.	Uncharacterized protein.	0.410
C1H46_010131	C1H46_009863	A0A540MZY7	A0A540N0I7	BTB domain-containing protein.	C2 domain-containing protein.	0.453
C1H46_010131	C1H46_010460	A0A540MZY7	A0A540N090	BTB domain-containing protein.	F-box domain-containing protein.	0.460