(17 nodes) Mixed, incl. Atg8 activating enzyme activity, and Isopeptide bond network (Malus baccata)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	C1H46_044058	BHLH domain-containing protein. (1313 aa)
	C1H46_031724	WD_REPEATS_REGION domain-containing protein. (508 aa)
	C1H46_029456	WD_REPEATS_REGION domain-containing protein. (508 aa)
	C1H46_029397	Cysteine protease. (487 aa)
	C1H46_026352	Autophagy-related protein. (199 aa)
	C1H46_026351	Autophagy-related protein. (242 aa)
	C1H46_018329	Autophagy protein 5; Required for autophagy. (303 aa)
	C1H46_018190	Ubiquitin-like protein ATG12; Ubiquitin-like protein involved in cytoplasm to vacuole transport (Cvt) and autophagic vesicle formation. Belongs to the ATG12 family. (104 aa)
	C1H46_017491	Autophagy-related protein. (118 aa)
	C1H46_017493	Autophagy-related protein. (95 aa)
	C1H46_016591	Autophagy-related protein 3. (308 aa)
	C1H46_013299	Ubiquitin-like modifier-activating enzyme ATG7; E1-like activating enzyme involved in the 2 ubiquitin-like systems required for autophagy. (638 aa)
	C1H46_011642	Uncharacterized protein. (366 aa)
	C1H46_009924	Uncharacterized protein. (1543 aa)
	C1H46_007017	Autophagy protein 5; Required for autophagy. (366 aa)
	C1H46_003564	Autophagy-related protein. (238 aa)
	C1H46_002896	Autophagy-related protein. (133 aa)

Your Current Organism:

Malus baccata

NCBI taxonomy Id: 106549
Other names: M. baccata, Malus baccata (L.) Borkh., shan jing zi

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
C1H46_002896	C1H46_003564	A0A540NKH5	A0A540NIK7	Autophagy-related protein.	Autophagy-related protein.	0.582
C1H46_002896	C1H46_007017	A0A540NKH5	A0A540N8I5	Autophagy-related protein.	Autophagy protein 5; Required for autophagy.	0.715
C1H46_002896	C1H46_009924	A0A540NKH5	A0A540N0C6	Autophagy-related protein.	Uncharacterized protein.	0.680
C1H46_002896	C1H46_011642	A0A540NKH5	A0A540MVE8	Autophagy-related protein.	Uncharacterized protein.	0.835
C1H46_002896	C1H46_013299	A0A540NKH5	A0A540MQH5	Autophagy-related protein.	Ubiquitin-like modifier-activating enzyme ATG7; E1-like activating enzyme involved in the 2 ubiquitin-like systems required for autophagy.	0.991
C1H46_002896	C1H46_016591	A0A540NKH5	A0A540MGH6	Autophagy-related protein.	Autophagy-related protein 3.	0.980
C1H46_002896	C1H46_018190	A0A540NKH5	A0A540MBT8	Autophagy-related protein.	Ubiquitin-like protein ATG12; Ubiquitin-like protein involved in cytoplasm to vacuole transport (Cvt) and autophagic vesicle formation. Belongs to the ATG12 family.	0.831
C1H46_002896	C1H46_018329	A0A540NKH5	A0A540MB65	Autophagy-related protein.	Autophagy protein 5; Required for autophagy.	0.715
C1H46_002896	C1H46_026351	A0A540NKH5	A0A540LNJ0	Autophagy-related protein.	Autophagy-related protein.	0.601
C1H46_002896	C1H46_026352	A0A540NKH5	A0A540LNI9	Autophagy-related protein.	Autophagy-related protein.	0.436
C1H46_002896	C1H46_029397	A0A540NKH5	A0A540LF63	Autophagy-related protein.	Cysteine protease.	0.993
C1H46_002896	C1H46_029456	A0A540NKH5	A0A540LER2	Autophagy-related protein.	WD_REPEATS_REGION domain-containing protein.	0.695
C1H46_002896	C1H46_031724	A0A540NKH5	A0A540L8Q5	Autophagy-related protein.	WD_REPEATS_REGION domain-containing protein.	0.695
C1H46_002896	C1H46_044058	A0A540NKH5	A0A540K8A9	Autophagy-related protein.	BHLH domain-containing protein.	0.991
C1H46_003564	C1H46_002896	A0A540NIK7	A0A540NKH5	Autophagy-related protein.	Autophagy-related protein.	0.582
C1H46_003564	C1H46_007017	A0A540NIK7	A0A540N8I5	Autophagy-related protein.	Autophagy protein 5; Required for autophagy.	0.714
C1H46_003564	C1H46_009924	A0A540NIK7	A0A540N0C6	Autophagy-related protein.	Uncharacterized protein.	0.679
C1H46_003564	C1H46_011642	A0A540NIK7	A0A540MVE8	Autophagy-related protein.	Uncharacterized protein.	0.791
C1H46_003564	C1H46_013299	A0A540NIK7	A0A540MQH5	Autophagy-related protein.	Ubiquitin-like modifier-activating enzyme ATG7; E1-like activating enzyme involved in the 2 ubiquitin-like systems required for autophagy.	0.982
C1H46_003564	C1H46_016591	A0A540NIK7	A0A540MGH6	Autophagy-related protein.	Autophagy-related protein 3.	0.967