(38 nodes) Cobalt ion binding network (Malus baccata)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	C1H46_011124	Uncharacterized protein. (162 aa)
	C1H46_010994	Uncharacterized protein. (252 aa)
	C1H46_009834	PKS_ER domain-containing protein. (448 aa)
	C1H46_009810	Uncharacterized protein. (207 aa)
	C1H46_010035	Ribosomal_TL5_C domain-containing protein. (268 aa)
	C1H46_009087	Uncharacterized protein. (571 aa)
	C1H46_006432	Uncharacterized protein. (192 aa)
	C1H46_006063	Uncharacterized protein. (150 aa)
	C1H46_003690	Uncharacterized protein. (162 aa)
	C1H46_000293	Uncharacterized protein. (132 aa)
	C1H46_030433	Transket_pyr domain-containing protein. (629 aa)
	C1H46_030432	E1_dh domain-containing protein. (365 aa)
	C1H46_028877	Uncharacterized protein. (99 aa)
	C1H46_027999	GTP_EFTU_D3 domain-containing protein. (133 aa)
	C1H46_026096	Amidohydro-rel domain-containing protein. (469 aa)
	C1H46_024413	Elongation factor Tu; This protein promotes the GTP-dependent binding of aminoacyl- tRNA to the A-site of ribosomes during protein biosynthesis. (450 aa)
	C1H46_024041	ATP-dependent Clp protease proteolytic subunit. (116 aa)
	C1H46_022251	Fe-S_biosyn domain-containing protein. (464 aa)
	C1H46_022403	Aldedh domain-containing protein. (554 aa)
	C1H46_021353	Transket_pyr domain-containing protein. (1019 aa)
	C1H46_041371	PKS_ER domain-containing protein. (448 aa)
	C1H46_014560	ATP-dependent Clp protease proteolytic subunit. (116 aa)
	C1H46_012760	Uncharacterized protein. (330 aa)
	C1H46_012435	Uncharacterized protein. (71 aa)
	C1H46_038308	Uncharacterized protein. (259 aa)
	C1H46_037117	Uncharacterized protein. (155 aa)
	C1H46_036876	Transket_pyr domain-containing protein. (1011 aa)
	C1H46_034095	Uncharacterized protein. (186 aa)
	C1H46_039420	Aldedh domain-containing protein. (545 aa)
	C1H46_041335	Uncharacterized protein. (389 aa)
	C1H46_015014	Uncharacterized protein; Belongs to the plant dehydrin family. (536 aa)
	C1H46_041772	Amidohydro-rel domain-containing protein. (422 aa)
	C1H46_041742	Uncharacterized protein. (240 aa)
	C1H46_045445	Uncharacterized protein. (86 aa)
	C1H46_033992	Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis. (133 aa)
	C1H46_033651	Uncharacterized protein. (207 aa)
	C1H46_020196	Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis. (133 aa)
	C1H46_020298	Ribosomal_TL5_C domain-containing protein. (497 aa)

Your Current Organism:

Malus baccata

NCBI taxonomy Id: 106549
Other names: M. baccata, Malus baccata (L.) Borkh., shan jing zi

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
C1H46_000293	C1H46_003690	A0A540NTJ8	A0A540NIB5	Uncharacterized protein.	Uncharacterized protein.	0.939
C1H46_000293	C1H46_006063	A0A540NTJ8	A0A540NB65	Uncharacterized protein.	Uncharacterized protein.	0.845
C1H46_000293	C1H46_010994	A0A540NTJ8	A0A540MXE2	Uncharacterized protein.	Uncharacterized protein.	0.845
C1H46_000293	C1H46_011124	A0A540NTJ8	A0A540MWZ2	Uncharacterized protein.	Uncharacterized protein.	0.939
C1H46_000293	C1H46_020196	A0A540NTJ8	A0A540M5Y1	Uncharacterized protein.	Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis.	0.967
C1H46_000293	C1H46_033992	A0A540NTJ8	A0A540L2D7	Uncharacterized protein.	Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis.	0.967
C1H46_000293	C1H46_045445	A0A540NTJ8	A0A540K569	Uncharacterized protein.	Uncharacterized protein.	0.845
C1H46_003690	C1H46_000293	A0A540NIB5	A0A540NTJ8	Uncharacterized protein.	Uncharacterized protein.	0.939
C1H46_003690	C1H46_006063	A0A540NIB5	A0A540NB65	Uncharacterized protein.	Uncharacterized protein.	0.845
C1H46_003690	C1H46_010994	A0A540NIB5	A0A540MXE2	Uncharacterized protein.	Uncharacterized protein.	0.845
C1H46_003690	C1H46_020196	A0A540NIB5	A0A540M5Y1	Uncharacterized protein.	Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis.	0.967
C1H46_003690	C1H46_033992	A0A540NIB5	A0A540L2D7	Uncharacterized protein.	Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis.	0.967
C1H46_003690	C1H46_037117	A0A540NIB5	A0A540KT64	Uncharacterized protein.	Uncharacterized protein.	0.940
C1H46_003690	C1H46_045445	A0A540NIB5	A0A540K569	Uncharacterized protein.	Uncharacterized protein.	0.845
C1H46_006063	C1H46_000293	A0A540NB65	A0A540NTJ8	Uncharacterized protein.	Uncharacterized protein.	0.845
C1H46_006063	C1H46_003690	A0A540NB65	A0A540NIB5	Uncharacterized protein.	Uncharacterized protein.	0.845
C1H46_006063	C1H46_011124	A0A540NB65	A0A540MWZ2	Uncharacterized protein.	Uncharacterized protein.	0.845
C1H46_006063	C1H46_020196	A0A540NB65	A0A540M5Y1	Uncharacterized protein.	Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis.	0.521
C1H46_006063	C1H46_021353	A0A540NB65	A0A540M3C5	Uncharacterized protein.	Transket_pyr domain-containing protein.	0.527
C1H46_006063	C1H46_024413	A0A540NB65	A0A540LUK3	Uncharacterized protein.	Elongation factor Tu; This protein promotes the GTP-dependent binding of aminoacyl- tRNA to the A-site of ribosomes during protein biosynthesis.	0.772