(25 nodes) Set1C/COMPASS complex network (Malus baccata)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	C1H46_004098	GYF domain-containing protein. (539 aa)
	C1H46_000220	WD_REPEATS_REGION domain-containing protein. (144 aa)
	C1H46_001017	Uncharacterized protein; Belongs to the class V-like SAM-binding methyltransferase superfamily. Histone-lysine methyltransferase family. TRX/MLL subfamily. (1021 aa)
	C1H46_001378	Uncharacterized protein. (432 aa)
	C1H46_028502	Uncharacterized protein. (94 aa)
	C1H46_026733	WD_REPEATS_REGION domain-containing protein. (511 aa)
	C1H46_026205	Uncharacterized protein. (1028 aa)
	C1H46_025826	Uncharacterized protein. (85 aa)
	C1H46_019826	Uncharacterized protein; Belongs to the class V-like SAM-binding methyltransferase superfamily. Histone-lysine methyltransferase family. TRX/MLL subfamily. (1035 aa)
	C1H46_017897	WD_REPEATS_REGION domain-containing protein. (192 aa)
	C1H46_017075	Uncharacterized protein. (142 aa)
	C1H46_016331	WD_REPEATS_REGION domain-containing protein. (338 aa)
	C1H46_014612	Uncharacterized protein. (418 aa)
	C1H46_012464	B30.2/SPRY domain-containing protein. (357 aa)
	C1H46_009842	WD_REPEATS_REGION domain-containing protein. (319 aa)
	C1H46_009277	Uncharacterized protein. (302 aa)
	C1H46_044132	WD_REPEATS_REGION domain-containing protein. (319 aa)
	C1H46_042066	Uncharacterized protein. (1128 aa)
	C1H46_034670	Uncharacterized protein. (946 aa)
	C1H46_034531	WD_REPEATS_REGION domain-containing protein. (524 aa)
	C1H46_033500	WD_REPEATS_REGION domain-containing protein. (331 aa)
	C1H46_030454	Uncharacterized protein. (1165 aa)
	C1H46_009276	JmjC domain-containing protein. (566 aa)
	C1H46_004099	SET domain-containing protein. (173 aa)
	C1H46_007509	PWWP domain-containing protein. (244 aa)

Your Current Organism:

Malus baccata

NCBI taxonomy Id: 106549
Other names: M. baccata, Malus baccata (L.) Borkh., shan jing zi

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
C1H46_000220	C1H46_012464	A0A540NTF1	A0A540MTZ5	WD_REPEATS_REGION domain-containing protein.	B30.2/SPRY domain-containing protein.	0.722
C1H46_000220	C1H46_016331	A0A540NTF1	A0A540MH35	WD_REPEATS_REGION domain-containing protein.	WD_REPEATS_REGION domain-containing protein.	0.566
C1H46_000220	C1H46_026733	A0A540NTF1	A0A540LN37	WD_REPEATS_REGION domain-containing protein.	WD_REPEATS_REGION domain-containing protein.	0.490
C1H46_000220	C1H46_033500	A0A540NTF1	A0A540L378	WD_REPEATS_REGION domain-containing protein.	WD_REPEATS_REGION domain-containing protein.	0.527
C1H46_000220	C1H46_034531	A0A540NTF1	A0A540L0P3	WD_REPEATS_REGION domain-containing protein.	WD_REPEATS_REGION domain-containing protein.	0.490
C1H46_001017	C1H46_012464	A0A540NSA9	A0A540MTZ5	Uncharacterized protein; Belongs to the class V-like SAM-binding methyltransferase superfamily. Histone-lysine methyltransferase family. TRX/MLL subfamily.	B30.2/SPRY domain-containing protein.	0.969
C1H46_001017	C1H46_016331	A0A540NSA9	A0A540MH35	Uncharacterized protein; Belongs to the class V-like SAM-binding methyltransferase superfamily. Histone-lysine methyltransferase family. TRX/MLL subfamily.	WD_REPEATS_REGION domain-containing protein.	0.750
C1H46_001017	C1H46_017075	A0A540NSA9	A0A540MEZ3	Uncharacterized protein; Belongs to the class V-like SAM-binding methyltransferase superfamily. Histone-lysine methyltransferase family. TRX/MLL subfamily.	Uncharacterized protein.	0.750
C1H46_001017	C1H46_026733	A0A540NSA9	A0A540LN37	Uncharacterized protein; Belongs to the class V-like SAM-binding methyltransferase superfamily. Histone-lysine methyltransferase family. TRX/MLL subfamily.	WD_REPEATS_REGION domain-containing protein.	0.909
C1H46_001017	C1H46_033500	A0A540NSA9	A0A540L378	Uncharacterized protein; Belongs to the class V-like SAM-binding methyltransferase superfamily. Histone-lysine methyltransferase family. TRX/MLL subfamily.	WD_REPEATS_REGION domain-containing protein.	0.750
C1H46_001017	C1H46_034531	A0A540NSA9	A0A540L0P3	Uncharacterized protein; Belongs to the class V-like SAM-binding methyltransferase superfamily. Histone-lysine methyltransferase family. TRX/MLL subfamily.	WD_REPEATS_REGION domain-containing protein.	0.909
C1H46_004098	C1H46_009276	A0A540NGX0	A0A540N283	GYF domain-containing protein.	JmjC domain-containing protein.	0.512
C1H46_004098	C1H46_009277	A0A540NGX0	A0A540N269	GYF domain-containing protein.	Uncharacterized protein.	0.523
C1H46_004098	C1H46_012464	A0A540NGX0	A0A540MTZ5	GYF domain-containing protein.	B30.2/SPRY domain-containing protein.	0.969
C1H46_004098	C1H46_016331	A0A540NGX0	A0A540MH35	GYF domain-containing protein.	WD_REPEATS_REGION domain-containing protein.	0.742
C1H46_004098	C1H46_017075	A0A540NGX0	A0A540MEZ3	GYF domain-containing protein.	Uncharacterized protein.	0.742
C1H46_004098	C1H46_026733	A0A540NGX0	A0A540LN37	GYF domain-containing protein.	WD_REPEATS_REGION domain-containing protein.	0.909
C1H46_004098	C1H46_033500	A0A540NGX0	A0A540L378	GYF domain-containing protein.	WD_REPEATS_REGION domain-containing protein.	0.742
C1H46_004098	C1H46_034531	A0A540NGX0	A0A540L0P3	GYF domain-containing protein.	WD_REPEATS_REGION domain-containing protein.	0.909
C1H46_004098	C1H46_034670	A0A540NGX0	A0A540L001	GYF domain-containing protein.	Uncharacterized protein.	0.523