(34 nodes) Lysine biosynthesis network (Malus baccata)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	C1H46_042833	Aminotran_1_2 domain-containing protein. (364 aa)
	C1H46_039655	Uncharacterized protein. (767 aa)
	C1H46_038972	ACT domain-containing protein. (568 aa)
	C1H46_036480	Uncharacterized protein. (595 aa)
	C1H46_035796	Aminotran_1_2 domain-containing protein. (398 aa)
	C1H46_035798	Uncharacterized protein. (147 aa)
	C1H46_035797	Aminotran_1_2 domain-containing protein. (462 aa)
	C1H46_035512	ACT domain-containing protein. (568 aa)
	C1H46_035038	Uncharacterized protein. (74 aa)
	C1H46_034307	Uncharacterized protein. (488 aa)
	C1H46_034232	Uncharacterized protein. (362 aa)
	C1H46_030780	DapB_N domain-containing protein. (293 aa)
	C1H46_028931	Homoserine dehydrogenase. (377 aa)
	C1H46_028633	Mur_ligase domain-containing protein. (114 aa)
	C1H46_028634	Uncharacterized protein. (115 aa)
	C1H46_028419	4-hydroxy-tetrahydrodipicolinate synthase; Belongs to the DapA family. (337 aa)
	C1H46_028420	4-hydroxy-tetrahydrodipicolinate synthase; Belongs to the DapA family. (337 aa)
	C1H46_026679	Semialdhyde_dh domain-containing protein. (90 aa)
	C1H46_026435	DapB_C domain-containing protein. (277 aa)
	C1H46_024719	Uncharacterized protein. (918 aa)
	C1H46_023992	Semialdhyde_dh domain-containing protein. (380 aa)
	C1H46_019031	Uncharacterized protein. (488 aa)
	C1H46_012892	Aminotran_1_2 domain-containing protein. (99 aa)
	C1H46_012651	Uncharacterized protein. (167 aa)
	C1H46_012653	Uncharacterized protein. (376 aa)
	C1H46_012652	Uncharacterized protein. (211 aa)
	C1H46_040159	Aminotran_1_2 domain-containing protein. (290 aa)
	C1H46_002294	Aminotran_1_2 domain-containing protein. (462 aa)
	C1H46_005449	Uncharacterized protein. (167 aa)
	C1H46_005448	Uncharacterized protein. (125 aa)
	C1H46_006467	Uncharacterized protein. (918 aa)
	C1H46_010484	DapB_N domain-containing protein. (204 aa)
	C1H46_042651	Uncharacterized protein. (478 aa)
	C1H46_043540	Semialdhyde_dh domain-containing protein. (380 aa)

Your Current Organism:

Malus baccata

NCBI taxonomy Id: 106549
Other names: M. baccata, Malus baccata (L.) Borkh., shan jing zi

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
C1H46_002294	C1H46_005448	A0A540NM36	A0A540NDE2	Aminotran_1_2 domain-containing protein.	Uncharacterized protein.	0.894
C1H46_002294	C1H46_005449	A0A540NM36	A0A540NDF5	Aminotran_1_2 domain-containing protein.	Uncharacterized protein.	0.894
C1H46_002294	C1H46_006467	A0A540NM36	A0A540NA56	Aminotran_1_2 domain-containing protein.	Uncharacterized protein.	0.721
C1H46_002294	C1H46_010484	A0A540NM36	A0A540MYT4	Aminotran_1_2 domain-containing protein.	DapB_N domain-containing protein.	0.685
C1H46_002294	C1H46_012651	A0A540NM36	A0A540MSD5	Aminotran_1_2 domain-containing protein.	Uncharacterized protein.	0.894
C1H46_002294	C1H46_012652	A0A540NM36	A0A540MSG0	Aminotran_1_2 domain-containing protein.	Uncharacterized protein.	0.894
C1H46_002294	C1H46_012653	A0A540NM36	A0A540MSD8	Aminotran_1_2 domain-containing protein.	Uncharacterized protein.	0.894
C1H46_002294	C1H46_019031	A0A540NM36	A0A540M9D7	Aminotran_1_2 domain-containing protein.	Uncharacterized protein.	0.795
C1H46_002294	C1H46_024719	A0A540NM36	A0A540LT98	Aminotran_1_2 domain-containing protein.	Uncharacterized protein.	0.721
C1H46_002294	C1H46_026435	A0A540NM36	A0A540LP21	Aminotran_1_2 domain-containing protein.	DapB_C domain-containing protein.	0.685
C1H46_002294	C1H46_028931	A0A540NM36	A0A540LGP9	Aminotran_1_2 domain-containing protein.	Homoserine dehydrogenase.	0.721
C1H46_002294	C1H46_034232	A0A540NM36	A0A540L191	Aminotran_1_2 domain-containing protein.	Uncharacterized protein.	0.894
C1H46_002294	C1H46_034307	A0A540NM36	A0A540L0W6	Aminotran_1_2 domain-containing protein.	Uncharacterized protein.	0.795
C1H46_002294	C1H46_035512	A0A540NM36	A0A540KXI7	Aminotran_1_2 domain-containing protein.	ACT domain-containing protein.	0.702
C1H46_002294	C1H46_036480	A0A540NM36	A0A540KUS2	Aminotran_1_2 domain-containing protein.	Uncharacterized protein.	0.702
C1H46_002294	C1H46_038972	A0A540NM36	A0A540KMM3	Aminotran_1_2 domain-containing protein.	ACT domain-containing protein.	0.702
C1H46_002294	C1H46_040159	A0A540NM36	A0A540KJA3	Aminotran_1_2 domain-containing protein.	Aminotran_1_2 domain-containing protein.	0.911
C1H46_005448	C1H46_002294	A0A540NDE2	A0A540NM36	Uncharacterized protein.	Aminotran_1_2 domain-containing protein.	0.894
C1H46_005448	C1H46_005449	A0A540NDE2	A0A540NDF5	Uncharacterized protein.	Uncharacterized protein.	0.476
C1H46_005448	C1H46_010484	A0A540NDE2	A0A540MYT4	Uncharacterized protein.	DapB_N domain-containing protein.	0.481