(100 nodes) Other types of O-glycan biosynthesis network (Malus baccata)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	C1H46_040739	Uncharacterized protein. (283 aa)
	C1H46_041890	FAD-binding FR-type domain-containing protein. (295 aa)
	C1H46_042242	POTRA domain-containing protein. (696 aa)
	C1H46_043155	Uncharacterized protein. (396 aa)
	C1H46_043287	Lon N-terminal domain-containing protein. (566 aa)
	C1H46_044336	Uncharacterized protein. (584 aa)
	C1H46_044853	Lon N-terminal domain-containing protein. (536 aa)
	C1H46_045764	Uncharacterized protein. (110 aa)
	C1H46_012084	Rab-GAP TBC domain-containing protein. (466 aa)
	C1H46_012528	Uncharacterized protein. (229 aa)
	C1H46_013801	Uncharacterized protein. (135 aa)
	C1H46_014868	Uncharacterized protein. (735 aa)
	C1H46_015189	Uncharacterized protein. (552 aa)
	C1H46_025741	TPR_REGION domain-containing protein. (979 aa)
	C1H46_001632	Uncharacterized protein. (78 aa)
	C1H46_001484	Uncharacterized protein. (498 aa)
	C1H46_004877	Uncharacterized protein. (290 aa)
	C1H46_016130	Uncharacterized protein. (478 aa)
	C1H46_016252	Uncharacterized protein. (829 aa)
	C1H46_016652	Uncharacterized protein. (214 aa)
	C1H46_017277	Uncharacterized protein. (101 aa)
	C1H46_017675	POTRA domain-containing protein. (548 aa)
	C1H46_018222	CAP10 domain-containing protein. (92 aa)
	C1H46_019007	Uncharacterized protein. (572 aa)
	C1H46_019238	ADF-H domain-containing protein. (707 aa)
	C1H46_019676	Uncharacterized protein. (363 aa)
	C1H46_019677	Uncharacterized protein. (602 aa)
	C1H46_022225	Uncharacterized protein; Belongs to the mitochondrial carrier (TC 2.A.29) family. (383 aa)
	C1H46_022525	Uncharacterized protein. (898 aa)
	C1H46_010881	Rab-GAP TBC domain-containing protein. (472 aa)
	C1H46_003174	Uncharacterized protein. (215 aa)
	C1H46_007350	rRNA N-glycosidase. (301 aa)
	C1H46_007260	Uncharacterized protein. (550 aa)
	C1H46_007417	rRNA N-glycosidase. (194 aa)
	C1H46_007349	rRNA N-glycosidase. (280 aa)
	C1H46_007352	rRNA N-glycosidase. (310 aa)
	C1H46_008014	Uncharacterized protein. (65 aa)
	C1H46_007355	rRNA N-glycosidase. (314 aa)
	C1H46_008185	Uncharacterized protein. (359 aa)
	C1H46_004121	Lon protease homolog, mitochondrial; ATP-dependent serine protease that mediates the selective degradation of misfolded, unassembled or oxidatively damaged polypeptides as well as certain short-lived regulatory proteins in the mitochondrial matrix. May also have a chaperone function in the assembly of inner membrane protein complexes. Participates in the regulation of mitochondrial gene expression and in the maintenance of the integrity of the mitochondrial genome. Binds to mitochondrial DNA in a site-specific manner; Belongs to the peptidase S16 family. (998 aa)
	C1H46_005714	Uncharacterized protein. (588 aa)
	C1H46_005562	Glycosyltransferase. (402 aa)
	C1H46_004122	Uncharacterized protein. (368 aa)
	C1H46_006196	Uncharacterized protein. (465 aa)
	C1H46_006767	Uncharacterized protein. (389 aa)
	C1H46_007390	Uncharacterized protein. (525 aa)
	C1H46_022600	Uncharacterized protein. (411 aa)
	C1H46_022754	CAP10 domain-containing protein. (491 aa)
	C1H46_023725	Uncharacterized protein. (483 aa)
	C1H46_023726	Uncharacterized protein. (499 aa)
	C1H46_024310	Uncharacterized protein. (746 aa)
	C1H46_024232	Uncharacterized protein. (477 aa)
	C1H46_024231	Uncharacterized protein. (455 aa)
	C1H46_024311	Glycosyltransferase. (435 aa)
	C1H46_024469	Uncharacterized protein. (475 aa)
	C1H46_024468	Uncharacterized protein. (286 aa)
	C1H46_025138	Uncharacterized protein. (94 aa)
	C1H46_025139	Uncharacterized protein. (162 aa)
	C1H46_025388	Uncharacterized protein; Belongs to the mitochondrial carrier (TC 2.A.29) family. (380 aa)
	C1H46_027257	Uncharacterized protein. (465 aa)
	C1H46_027255	Uncharacterized protein. (215 aa)
	C1H46_027256	Uncharacterized protein. (107 aa)
	C1H46_027306	TPR_REGION domain-containing protein. (912 aa)
	C1H46_027593	Uncharacterized protein. (495 aa)
	C1H46_027481	rRNA N-glycosidase. (548 aa)
	C1H46_027634	Uncharacterized protein. (135 aa)
	C1H46_027855	CAP10 domain-containing protein. (506 aa)
	C1H46_027854	CAP10 domain-containing protein. (528 aa)
	C1H46_028956	Uncharacterized protein; Belongs to the mitochondrial carrier (TC 2.A.29) family. (320 aa)
	C1H46_029423	POTRA domain-containing protein. (674 aa)
	C1H46_029329	Uncharacterized protein; Belongs to the mitochondrial carrier (TC 2.A.29) family. (384 aa)
	C1H46_030362	CAP10 domain-containing protein. (428 aa)
	C1H46_031588	Uncharacterized protein; Belongs to the glycosyltransferase 29 family. (424 aa)
	C1H46_032768	Fe2OG dioxygenase domain-containing protein. (232 aa)
	C1H46_032535	Malectin_like domain-containing protein. (947 aa)
	C1H46_033116	Rab-GAP TBC domain-containing protein. (458 aa)
	C1H46_033318	TPR_REGION domain-containing protein. (1163 aa)
	C1H46_034115	Uncharacterized protein; Belongs to the mitochondrial carrier (TC 2.A.29) family. (384 aa)
	C1H46_035180	Uncharacterized protein. (73 aa)
	C1H46_035776	Uncharacterized protein. (161 aa)
	C1H46_036598	Uncharacterized protein; Belongs to the mitochondrial carrier (TC 2.A.29) family. (563 aa)
	C1H46_037419	Lon protease homolog 2, peroxisomal; ATP-dependent serine protease that mediates the selective degradation of misfolded and unassembled polypeptides in the peroxisomal matrix. Necessary for type 2 peroxisome targeting signal (PTS2)-containing protein processing and facilitates peroxisome matrix protein import; Belongs to the peptidase S16 family. ECO:0000256\|PROSITE-. (869 aa)
	C1H46_037828	Uncharacterized protein. (320 aa)
	C1H46_038224	Lon protease homolog 2, peroxisomal; ATP-dependent serine protease that mediates the selective degradation of misfolded and unassembled polypeptides in the peroxisomal matrix. Necessary for type 2 peroxisome targeting signal (PTS2)-containing protein processing and facilitates peroxisome matrix protein import; Belongs to the peptidase S16 family. ECO:0000256\|PROSITE-. (898 aa)
	C1H46_039004	Uncharacterized protein. (187 aa)
	C1H46_039468	Uncharacterized protein. (387 aa)
	C1H46_039560	Lon proteolytic domain-containing protein; Belongs to the peptidase S16 family. (238 aa)
	C1H46_039561	Uncharacterized protein; Belongs to the peptidase S16 family. (741 aa)
	C1H46_039658	rRNA N-glycosidase. (280 aa)
	C1H46_008627	Uncharacterized protein. (75 aa)
	C1H46_010441	CAP10 domain-containing protein. (537 aa)
	C1H46_039660	rRNA N-glycosidase. (252 aa)
	C1H46_039663	rRNA N-glycosidase. (301 aa)
	C1H46_040613	Uncharacterized protein. (191 aa)
	C1H46_010512	CAP10 domain-containing protein. (523 aa)
	C1H46_014870	Uncharacterized protein. (234 aa)
	C1H46_003425	CAP10 domain-containing protein. (86 aa)
	C1H46_002946	Uncharacterized protein; Belongs to the glycosyltransferase 29 family. (427 aa)
	C1H46_001859	Uncharacterized protein. (55 aa)
	C1H46_003130	Uncharacterized protein; Belongs to the mitochondrial carrier (TC 2.A.29) family. (320 aa)

Your Current Organism:

Malus baccata

NCBI taxonomy Id: 106549
Other names: M. baccata, Malus baccata (L.) Borkh., shan jing zi

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
C1H46_001632	C1H46_039468	A0A540NP11	A0A540KLD2	Uncharacterized protein.	Uncharacterized protein.	0.411
C1H46_003174	C1H46_025138	A0A540NJD7	A0A540LSK4	Uncharacterized protein.	Uncharacterized protein.	0.518
C1H46_003174	C1H46_025139	A0A540NJD7	A0A540LS10	Uncharacterized protein.	Uncharacterized protein.	0.518
C1H46_003174	C1H46_027255	A0A540NJD7	A0A540LL86	Uncharacterized protein.	Uncharacterized protein.	0.518
C1H46_003174	C1H46_027256	A0A540NJD7	A0A540LL65	Uncharacterized protein.	Uncharacterized protein.	0.518
C1H46_003174	C1H46_027257	A0A540NJD7	A0A540LLR4	Uncharacterized protein.	Uncharacterized protein.	0.518
C1H46_004121	C1H46_019677	A0A540NGX3	A0A540M7K2	Lon protease homolog, mitochondrial; ATP-dependent serine protease that mediates the selective degradation of misfolded, unassembled or oxidatively damaged polypeptides as well as certain short-lived regulatory proteins in the mitochondrial matrix. May also have a chaperone function in the assembly of inner membrane protein complexes. Participates in the regulation of mitochondrial gene expression and in the maintenance of the integrity of the mitochondrial genome. Binds to mitochondrial DNA in a site-specific manner; Belongs to the peptidase S16 family.	Uncharacterized protein.	0.663
C1H46_004122	C1H46_008185	A0A540NI68	A0A540N5C0	Uncharacterized protein.	Uncharacterized protein.	0.915
C1H46_004122	C1H46_012528	A0A540NI68	A0A540MSY2	Uncharacterized protein.	Uncharacterized protein.	0.900
C1H46_004122	C1H46_019676	A0A540NI68	A0A540M7K7	Uncharacterized protein.	Uncharacterized protein.	0.886
C1H46_004122	C1H46_040613	A0A540NI68	A0A540KI14	Uncharacterized protein.	Uncharacterized protein.	0.885
C1H46_004122	C1H46_040739	A0A540NI68	A0A540KHN0	Uncharacterized protein.	Uncharacterized protein.	0.886
C1H46_004877	C1H46_019677	A0A540NES1	A0A540M7K2	Uncharacterized protein.	Uncharacterized protein.	0.663
C1H46_004877	C1H46_035180	A0A540NES1	A0A540KZ42	Uncharacterized protein.	Uncharacterized protein.	0.417
C1H46_005562	C1H46_006767	A0A540NCR9	A0A540N9A0	Glycosyltransferase.	Uncharacterized protein.	0.454
C1H46_005562	C1H46_014870	A0A540NCR9	A0A540ML95	Glycosyltransferase.	Uncharacterized protein.	0.400
C1H46_005562	C1H46_016130	A0A540NCR9	A0A540MIM3	Glycosyltransferase.	Uncharacterized protein.	0.516
C1H46_005562	C1H46_024311	A0A540NCR9	A0A540LUJ4	Glycosyltransferase.	Glycosyltransferase.	0.950
C1H46_005562	C1H46_040613	A0A540NCR9	A0A540KI14	Glycosyltransferase.	Uncharacterized protein.	0.443
C1H46_006767	C1H46_005562	A0A540N9A0	A0A540NCR9	Uncharacterized protein.	Glycosyltransferase.	0.454