(60 nodes) Sesquiterpenoid and triterpenoid biosynthesis network (Malus baccata)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	C1H46_042830	Uncharacterized protein. (94 aa)
	C1H46_015931	Epimerase domain-containing protein. (340 aa)
	C1H46_014993	Uncharacterized protein. (366 aa)
	C1H46_011932	SE domain-containing protein. (502 aa)
	C1H46_011931	SE domain-containing protein. (238 aa)
	C1H46_011933	SE domain-containing protein. (584 aa)
	C1H46_010445	Uncharacterized protein. (554 aa)
	C1H46_010958	Uncharacterized protein. (148 aa)
	C1H46_010269	Terpene_synth_C domain-containing protein. (57 aa)
	C1H46_010268	Uncharacterized protein. (576 aa)
	C1H46_044086	Uncharacterized protein. (560 aa)
	C1H46_043213	SQHop_cyclase_N domain-containing protein. (223 aa)
	C1H46_043124	Uncharacterized protein. (322 aa)
	C1H46_042828	SE domain-containing protein. (147 aa)
	C1H46_042534	Terpene_synth domain-containing protein. (165 aa)
	C1H46_042487	Uncharacterized protein. (563 aa)
	C1H46_037925	Uncharacterized protein. (560 aa)
	C1H46_037214	Uncharacterized protein. (528 aa)
	C1H46_037213	Uncharacterized protein. (530 aa)
	C1H46_034790	Terpene_synth_C domain-containing protein. (180 aa)
	C1H46_034792	Uncharacterized protein. (257 aa)
	C1H46_034699	Uncharacterized protein. (520 aa)
	C1H46_034791	Uncharacterized protein; Belongs to the terpene synthase family. (338 aa)
	C1H46_034695	Uncharacterized protein. (567 aa)
	C1H46_034449	SE domain-containing protein. (538 aa)
	C1H46_034320	SE domain-containing protein. (537 aa)
	C1H46_033404	Uncharacterized protein; Belongs to the terpene synthase family. (319 aa)
	C1H46_033178	SE domain-containing protein. (529 aa)
	C1H46_030176	SQHop_cyclase_N domain-containing protein. (368 aa)
	C1H46_033405	Uncharacterized protein; Belongs to the terpene synthase family. (649 aa)
	C1H46_033176	SE domain-containing protein. (528 aa)
	C1H46_017748	Terpene_synth_C domain-containing protein. (228 aa)
	C1H46_023126	Uncharacterized protein; Belongs to the terpene synthase family. (448 aa)
	C1H46_023133	Uncharacterized protein; Belongs to the terpene synthase family. (336 aa)
	C1H46_023132	Terpene_synth_C domain-containing protein. (182 aa)
	C1H46_023131	Uncharacterized protein; Belongs to the terpene synthase family. (259 aa)
	C1H46_023124	Uncharacterized protein; Belongs to the terpene synthase family. (429 aa)
	C1H46_023129	Uncharacterized protein; Belongs to the terpene synthase family. (411 aa)
	C1H46_045919	Uncharacterized protein. (78 aa)
	C1H46_045895	Uncharacterized protein. (69 aa)
	C1H46_045479	SE domain-containing protein. (231 aa)
	C1H46_044871	Uncharacterized protein. (264 aa)
	C1H46_044782	Uncharacterized protein. (104 aa)
	C1H46_010274	Terpene_synth domain-containing protein. (327 aa)
	C1H46_010271	Uncharacterized protein. (576 aa)
	C1H46_010275	Terpene_synth_C domain-containing protein. (114 aa)
	C1H46_009999	Uncharacterized protein. (183 aa)
	C1H46_002296	Uncharacterized protein. (530 aa)
	C1H46_001887	Uncharacterized protein. (89 aa)
	C1H46_001909	Uncharacterized protein. (830 aa)
	C1H46_001902	SQHop_cyclase_C domain-containing protein. (327 aa)
	C1H46_001894	Uncharacterized protein. (139 aa)
	C1H46_001901	Terpene cyclase/mutase family member; Belongs to the terpene cyclase/mutase family. (760 aa)
	C1H46_000007	Uncharacterized protein. (69 aa)
	C1H46_000261	Uncharacterized protein. (535 aa)
	C1H46_023127	Uncharacterized protein; Belongs to the terpene synthase family. (448 aa)
	C1H46_025631	Uncharacterized protein; Belongs to the cytochrome P450 family. (437 aa)
	C1H46_027129	SE domain-containing protein. (353 aa)
	C1H46_030191	Uncharacterized protein; Belongs to the terpene cyclase/mutase family. (595 aa)
	C1H46_030198	Uncharacterized protein. (849 aa)

Your Current Organism:

Malus baccata

NCBI taxonomy Id: 106549
Other names: M. baccata, Malus baccata (L.) Borkh., shan jing zi

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structured XML interaction data, according to the 'PSI-MI' data standard

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a flat-file format describing the coordinates and colors of nodes in the network

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
C1H46_000007	C1H46_000261	A0A540NSR7	A0A540NTH7	Uncharacterized protein.	Uncharacterized protein.	0.666
C1H46_000007	C1H46_002296	A0A540NSR7	A0A540NN79	Uncharacterized protein.	Uncharacterized protein.	0.666
C1H46_000007	C1H46_011931	A0A540NSR7	A0A540MUD4	Uncharacterized protein.	SE domain-containing protein.	0.666
C1H46_000007	C1H46_011932	A0A540NSR7	A0A540MUC8	Uncharacterized protein.	SE domain-containing protein.	0.666
C1H46_000007	C1H46_011933	A0A540NSR7	A0A540MUE6	Uncharacterized protein.	SE domain-containing protein.	0.666
C1H46_000007	C1H46_014993	A0A540NSR7	A0A540MKV2	Uncharacterized protein.	Uncharacterized protein.	0.531
C1H46_000007	C1H46_025631	A0A540NSR7	A0A540LQP3	Uncharacterized protein.	Uncharacterized protein; Belongs to the cytochrome P450 family.	0.807
C1H46_000007	C1H46_027129	A0A540NSR7	A0A540LLI5	Uncharacterized protein.	SE domain-containing protein.	0.666
C1H46_000007	C1H46_033176	A0A540NSR7	A0A540L451	Uncharacterized protein.	SE domain-containing protein.	0.666
C1H46_000007	C1H46_033178	A0A540NSR7	A0A540L431	Uncharacterized protein.	SE domain-containing protein.	0.666
C1H46_000007	C1H46_034320	A0A540NSR7	A0A540L0V0	Uncharacterized protein.	SE domain-containing protein.	0.666
C1H46_000007	C1H46_034449	A0A540NSR7	A0A540L0H6	Uncharacterized protein.	SE domain-containing protein.	0.666
C1H46_000007	C1H46_042828	A0A540NSR7	A0A540KBN1	Uncharacterized protein.	SE domain-containing protein.	0.666
C1H46_000007	C1H46_042830	A0A540NSR7	A0A540KBN9	Uncharacterized protein.	Uncharacterized protein.	0.666
C1H46_000007	C1H46_044782	A0A540NSR7	A0A540K638	Uncharacterized protein.	Uncharacterized protein.	0.666
C1H46_000007	C1H46_044871	A0A540NSR7	A0A540K5U5	Uncharacterized protein.	Uncharacterized protein.	0.531
C1H46_000007	C1H46_045479	A0A540NSR7	A0A540K440	Uncharacterized protein.	SE domain-containing protein.	0.666
C1H46_000007	C1H46_045919	A0A540NSR7	A0A540K2M8	Uncharacterized protein.	Uncharacterized protein.	0.763
C1H46_000261	C1H46_000007	A0A540NTH7	A0A540NSR7	Uncharacterized protein.	Uncharacterized protein.	0.666
C1H46_000261	C1H46_001887	A0A540NTH7	A0A540NN80	Uncharacterized protein.	Uncharacterized protein.	0.666