(91 nodes) Autophagy - other network (Malus baccata)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	C1H46_036348	Uncharacterized protein; Belongs to the PI3/PI4-kinase family. (844 aa)
	C1H46_036389	WD_REPEATS_REGION domain-containing protein. (160 aa)
	C1H46_038426	Serine/threonine-protein phosphatase. (306 aa)
	C1H46_038696	FAT domain-containing protein. (126 aa)
	C1H46_038695	FAT domain-containing protein. (83 aa)
	C1H46_038875	Autophagy-related protein. (265 aa)
	C1H46_039708	Autophagy-related protein. (427 aa)
	C1H46_039706	Autophagy-related protein. (426 aa)
	C1H46_002896	Autophagy-related protein. (133 aa)
	C1H46_002281	Serine/threonine-protein kinase TOR; Belongs to the PI3/PI4-kinase family. (2469 aa)
	C1H46_001949	Autophagy_act_C domain-containing protein. (579 aa)
	C1H46_025511	Serine/threonine-protein phosphatase. (306 aa)
	C1H46_025198	ATG13 domain-containing protein. (536 aa)
	C1H46_024868	Autophagy-related protein. (117 aa)
	C1H46_024864	Hexosyltransferase; Belongs to the glycosyltransferase 31 family. (411 aa)
	C1H46_024745	Hexosyltransferase; Belongs to the glycosyltransferase 31 family. (459 aa)
	C1H46_023494	Autophagy-related protein. (126 aa)
	C1H46_023492	Hexosyltransferase; Belongs to the glycosyltransferase 31 family. (237 aa)
	C1H46_022795	Protein kinase domain-containing protein. (284 aa)
	C1H46_021006	Hexosyltransferase; Belongs to the glycosyltransferase 31 family. (198 aa)
	C1H46_021021	Autophagy-related protein. (245 aa)
	C1H46_020562	Autophagy-related protein. (577 aa)
	C1H46_020614	Uncharacterized protein. (509 aa)
	C1H46_019908	Protein kinase domain-containing protein. (717 aa)
	C1H46_019848	Uncharacterized protein. (406 aa)
	C1H46_018329	Autophagy protein 5; Required for autophagy. (303 aa)
	C1H46_018190	Ubiquitin-like protein ATG12; Ubiquitin-like protein involved in cytoplasm to vacuole transport (Cvt) and autophagic vesicle formation. Belongs to the ATG12 family. (104 aa)
	C1H46_017767	Autophagy-related protein. (378 aa)
	C1H46_017491	Autophagy-related protein. (118 aa)
	C1H46_017493	Autophagy-related protein. (95 aa)
	C1H46_017146	Uncharacterized protein. (212 aa)
	C1H46_016868	Protein kinase domain-containing protein. (643 aa)
	C1H46_016923	Protein kinase domain-containing protein. (536 aa)
	C1H46_016591	Autophagy-related protein 3. (308 aa)
	C1H46_015446	Hexosyltransferase; Belongs to the glycosyltransferase 31 family. (398 aa)
	C1H46_015314	Serine/threonine-protein phosphatase. (263 aa)
	C1H46_014499	Uncharacterized protein. (126 aa)
	C1H46_014224	Autophagy-related protein. (311 aa)
	C1H46_013299	Ubiquitin-like modifier-activating enzyme ATG7; E1-like activating enzyme involved in the 2 ubiquitin-like systems required for autophagy. (638 aa)
	C1H46_012370	Serine/threonine-protein phosphatase. (227 aa)
	C1H46_011642	Uncharacterized protein. (366 aa)
	C1H46_009924	Uncharacterized protein. (1543 aa)
	C1H46_009590	Uncharacterized protein. (206 aa)
	C1H46_008431	Raptor_N domain-containing protein. (1031 aa)
	C1H46_007017	Autophagy protein 5; Required for autophagy. (366 aa)
	C1H46_004918	Autophagy_act_C domain-containing protein. (187 aa)
	C1H46_004212	ATG11 domain-containing protein. (281 aa)
	C1H46_004215	Uncharacterized protein. (739 aa)
	C1H46_003564	Autophagy-related protein. (238 aa)
	C1H46_003486	WD_REPEATS_REGION domain-containing protein. (133 aa)
	C1H46_001186	Autophagy-related protein. (175 aa)
	C1H46_001613	Autophagy-related protein. (125 aa)
	C1H46_001021	Uncharacterized protein. (507 aa)
	C1H46_034061	Serine/threonine-protein phosphatase. (115 aa)
	C1H46_033088	Uncharacterized protein; Belongs to the PI3/PI4-kinase family. (804 aa)
	C1H46_032996	Autophagy-related protein. (290 aa)
	C1H46_032606	ATG13 domain-containing protein. (620 aa)
	C1H46_031724	WD_REPEATS_REGION domain-containing protein. (508 aa)
	C1H46_031240	WD_REPEATS_REGION domain-containing protein. (1197 aa)
	C1H46_030729	Serine/threonine-protein kinase TOR. (2804 aa)
	C1H46_030030	Autophagy-related protein. (86 aa)
	C1H46_029456	WD_REPEATS_REGION domain-containing protein. (508 aa)
	C1H46_029397	Cysteine protease. (487 aa)
	C1H46_000370	Autophagy-related protein. (166 aa)
	C1H46_000774	Autophagy-related protein 9; Involved in autophagy and cytoplasm to vacuole transport (Cvt) vesicle formation. Plays a key role in the organization of the preautophagosomal structure/phagophore assembly site (PAS), the nucleating site for formation of the sequestering vesicle. Belongs to the ATG9 family. (881 aa)
	C1H46_001187	Autophagy-related protein. (245 aa)
	C1H46_040291	Autophagy-related protein. (466 aa)
	C1H46_040287	Autophagy-related protein. (423 aa)
	C1H46_041017	Autophagy-related protein 9; Involved in autophagy and cytoplasm to vacuole transport (Cvt) vesicle formation. Plays a key role in the organization of the preautophagosomal structure/phagophore assembly site (PAS), the nucleating site for formation of the sequestering vesicle. Belongs to the ATG9 family. (525 aa)
	C1H46_043219	Autophagy-related protein. (216 aa)
	C1H46_044195	Uncharacterized protein. (406 aa)
	C1H46_044035	DUF4094 domain-containing protein. (578 aa)
	C1H46_044058	BHLH domain-containing protein. (1313 aa)
	C1H46_044034	Autophagy-related protein. (129 aa)
	C1H46_044437	Chorein_N domain-containing protein. (1705 aa)
	C1H46_044497	Hexosyltransferase; Belongs to the glycosyltransferase 31 family. (380 aa)
	C1H46_044483	Uncharacterized protein. (1018 aa)
	C1H46_045308	ATG_C domain-containing protein. (224 aa)
	C1H46_045383	ATG13 domain-containing protein. (517 aa)
	C1H46_045436	Hexosyltransferase; Belongs to the glycosyltransferase 31 family. (150 aa)
	C1H46_045518	Autophagy-related protein. (62 aa)
	C1H46_045798	Uncharacterized protein. (89 aa)
	C1H46_029398	Cysteine protease. (483 aa)
	C1H46_028559	ATG13 domain-containing protein. (1051 aa)
	C1H46_028126	Serine/threonine-protein phosphatase. (306 aa)
	C1H46_027362	Hexosyltransferase; Belongs to the glycosyltransferase 31 family. (418 aa)
	C1H46_027363	Autophagy-related protein. (119 aa)
	C1H46_026352	Autophagy-related protein. (199 aa)
	C1H46_026351	Autophagy-related protein. (242 aa)
	C1H46_025791	Hexosyltransferase; Belongs to the glycosyltransferase 31 family. (408 aa)
	C1H46_035117	Chorein_N domain-containing protein. (1216 aa)

Your Current Organism:

Malus baccata

NCBI taxonomy Id: 106549
Other names: M. baccata, Malus baccata (L.) Borkh., shan jing zi

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
C1H46_000370	C1H46_001021	A0A540NSQ3	A0A540NQY1	Autophagy-related protein.	Uncharacterized protein.	0.659
C1H46_000370	C1H46_001186	A0A540NSQ3	A0A540NPZ5	Autophagy-related protein.	Autophagy-related protein.	0.411
C1H46_000370	C1H46_002896	A0A540NSQ3	A0A540NKH5	Autophagy-related protein.	Autophagy-related protein.	0.580
C1H46_000370	C1H46_007017	A0A540NSQ3	A0A540N8I5	Autophagy-related protein.	Autophagy protein 5; Required for autophagy.	0.714
C1H46_000370	C1H46_009924	A0A540NSQ3	A0A540N0C6	Autophagy-related protein.	Uncharacterized protein.	0.679
C1H46_000370	C1H46_011642	A0A540NSQ3	A0A540MVE8	Autophagy-related protein.	Uncharacterized protein.	0.791
C1H46_000370	C1H46_013299	A0A540NSQ3	A0A540MQH5	Autophagy-related protein.	Ubiquitin-like modifier-activating enzyme ATG7; E1-like activating enzyme involved in the 2 ubiquitin-like systems required for autophagy.	0.982
C1H46_000370	C1H46_016591	A0A540NSQ3	A0A540MGH6	Autophagy-related protein.	Autophagy-related protein 3.	0.967
C1H46_000370	C1H46_016868	A0A540NSQ3	A0A540MFM3	Autophagy-related protein.	Protein kinase domain-containing protein.	0.759
C1H46_000370	C1H46_016923	A0A540NSQ3	A0A540MFV4	Autophagy-related protein.	Protein kinase domain-containing protein.	0.759
C1H46_000370	C1H46_017491	A0A540NSQ3	A0A540MDR2	Autophagy-related protein.	Autophagy-related protein.	0.577
C1H46_000370	C1H46_017493	A0A540NSQ3	A0A540MDS0	Autophagy-related protein.	Autophagy-related protein.	0.590
C1H46_000370	C1H46_018190	A0A540NSQ3	A0A540MBT8	Autophagy-related protein.	Ubiquitin-like protein ATG12; Ubiquitin-like protein involved in cytoplasm to vacuole transport (Cvt) and autophagic vesicle formation. Belongs to the ATG12 family.	0.793
C1H46_000370	C1H46_018329	A0A540NSQ3	A0A540MB65	Autophagy-related protein.	Autophagy protein 5; Required for autophagy.	0.714
C1H46_000370	C1H46_019908	A0A540NSQ3	A0A540M6V8	Autophagy-related protein.	Protein kinase domain-containing protein.	0.751
C1H46_000370	C1H46_020614	A0A540NSQ3	A0A540M511	Autophagy-related protein.	Uncharacterized protein.	0.659
C1H46_000370	C1H46_021021	A0A540NSQ3	A0A540M4C1	Autophagy-related protein.	Autophagy-related protein.	0.404
C1H46_000370	C1H46_022795	A0A540NSQ3	A0A540LZC8	Autophagy-related protein.	Protein kinase domain-containing protein.	0.751
C1H46_000370	C1H46_026351	A0A540NSQ3	A0A540LNJ0	Autophagy-related protein.	Autophagy-related protein.	0.419
C1H46_000370	C1H46_026352	A0A540NSQ3	A0A540LNI9	Autophagy-related protein.	Autophagy-related protein.	0.403