STRINGSTRING
wdr20 wdr20 wdr48 wdr48 usp1 usp1 usp12 usp12 LOC101467972 LOC101467972
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
wdr20WD repeat domain 20a. (614 aa)
wdr48WD repeat domain 48b. (685 aa)
usp1Ubiquitin carboxyl-terminal hydrolase. (760 aa)
usp12Ubiquitin specific peptidase 12a; Belongs to the peptidase C19 family. (372 aa)
LOC101467972DM1 locus, WD repeat containing. (643 aa)
Your Current Organism:
Maylandia zebra
NCBI taxonomy Id: 106582
Other names: M. zebra, Metriaclima zebra, Pseudotropheus zebra, zebra mbuna
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