STRINGSTRING
pdzrn3 pdzrn3 LOC101478294 LOC101478294 slc38a2 slc38a2 LOC101476250 LOC101476250 SPNS2 SPNS2 LOC101465340 LOC101465340
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
pdzrn3PDZ domain containing RING finger 3b. (1044 aa)
LOC101478294Uncharacterized protein. (565 aa)
slc38a2Solute carrier family 38 member 2. (510 aa)
LOC101476250Solute carrier family 25 member 25a; Belongs to the mitochondrial carrier (TC 2.A.29) family. (471 aa)
SPNS2Sphingolipid transporter 2. (503 aa)
LOC101465340Solute carrier family 38 member 5a. (475 aa)
Your Current Organism:
Maylandia zebra
NCBI taxonomy Id: 106582
Other names: M. zebra, Metriaclima zebra, Pseudotropheus zebra, zebra mbuna
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