18 items (Maylandia zebra) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	umps	Uridine monophosphate synthetase. (485 aa)
	dhodh	Dihydroorotate dehydrogenase (quinone), mitochondrial; Belongs to the dihydroorotate dehydrogenase family. Type 2 subfamily. (412 aa)
	LOC101467632	Golgi transport 1Bb. (138 aa)
	oxnad1	Oxidoreductase NAD-binding domain containing 1. (315 aa)
	dpyd	Dihydropyrimidine dehydrogenase [NADP(+)]; Involved in pyrimidine base degradation. Catalyzes the reduction of uracil and thymine; Belongs to the dihydropyrimidine dehydrogenase family. (1021 aa)
	LOC101468039	Uncharacterized protein. (605 aa)
	ENSMZEP00005020086	Golgi transport 1Bb. (124 aa)
	ENSMZEP00005020783	Dihydropyrimidinase like 5a. (512 aa)
	LOC101471116	Dihydropyrimidinase like 2b. (566 aa)
	GOLT1B	Golgi transport 1Ba. (138 aa)
	LOC101479114	Zgc:110789. (617 aa)
	tmem116	Si:ch211-157p22.10. (367 aa)
	LOC101477088	Carbamoyl-phosphate synthetase 2, aspartate transcarbamylase, and dihydroorotase. (2142 aa)
	LOC101476437	Si:dkey-30c15.2. (261 aa)
	ENSMZEP00005031299	Orotidine 5'-phosphate decarboxylase; Belongs to the OMP decarboxylase family. (462 aa)
	LOC101471907	Amidohydro-rel domain-containing protein. (569 aa)
	ENSMZEP00005037469	Orotidine 5'-phosphate decarboxylase; Belongs to the OMP decarboxylase family. (228 aa)
	ENSMZEP00005037470	Uncharacterized protein. (64 aa)

Your Current Organism:

Maylandia zebra

NCBI taxonomy Id: 106582
Other names: M. zebra, Metriaclima zebra, Pseudotropheus zebra, zebra mbuna

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structured XML interaction data, according to the 'PSI-MI' data standard

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node degree of proteins in your network (given the current score cut-off)

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a flat-file format describing the coordinates and colors of nodes in the network

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MFA: multi-fasta format - containing the aminoacid sequences in the network

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSMZEP00005020086	ENSMZEP00005020783	ENSMZEP00005020086	ENSMZEP00005020783	Golgi transport 1Bb.	Dihydropyrimidinase like 5a.	0.653
ENSMZEP00005020086	ENSMZEP00005031299	ENSMZEP00005020086	ENSMZEP00005031299	Golgi transport 1Bb.	Orotidine 5'-phosphate decarboxylase; Belongs to the OMP decarboxylase family.	0.852
ENSMZEP00005020086	ENSMZEP00005037469	ENSMZEP00005020086	ENSMZEP00005037469	Golgi transport 1Bb.	Orotidine 5'-phosphate decarboxylase; Belongs to the OMP decarboxylase family.	0.852
ENSMZEP00005020086	ENSMZEP00005037470	ENSMZEP00005020086	ENSMZEP00005037470	Golgi transport 1Bb.	Uncharacterized protein.	0.852
ENSMZEP00005020086	LOC101468039	ENSMZEP00005020086	ENSMZEP00005014289	Golgi transport 1Bb.	Uncharacterized protein.	0.658
ENSMZEP00005020086	LOC101471116	ENSMZEP00005020086	ENSMZEP00005021064	Golgi transport 1Bb.	Dihydropyrimidinase like 2b.	0.653
ENSMZEP00005020086	LOC101471907	ENSMZEP00005020086	ENSMZEP00005034467	Golgi transport 1Bb.	Amidohydro-rel domain-containing protein.	0.653
ENSMZEP00005020086	LOC101476437	ENSMZEP00005020086	ENSMZEP00005026451	Golgi transport 1Bb.	Si:dkey-30c15.2.	0.645
ENSMZEP00005020086	LOC101477088	ENSMZEP00005020086	ENSMZEP00005026227	Golgi transport 1Bb.	Carbamoyl-phosphate synthetase 2, aspartate transcarbamylase, and dihydroorotase.	0.645
ENSMZEP00005020086	LOC101479114	ENSMZEP00005020086	ENSMZEP00005022447	Golgi transport 1Bb.	Zgc:110789.	0.658
ENSMZEP00005020086	dhodh	ENSMZEP00005020086	ENSMZEP00005002486	Golgi transport 1Bb.	Dihydroorotate dehydrogenase (quinone), mitochondrial; Belongs to the dihydroorotate dehydrogenase family. Type 2 subfamily.	0.924
ENSMZEP00005020086	dpyd	ENSMZEP00005020086	ENSMZEP00005014216	Golgi transport 1Bb.	Dihydropyrimidine dehydrogenase [NADP(+)]; Involved in pyrimidine base degradation. Catalyzes the reduction of uracil and thymine; Belongs to the dihydropyrimidine dehydrogenase family.	0.924
ENSMZEP00005020086	oxnad1	ENSMZEP00005020086	ENSMZEP00005012759	Golgi transport 1Bb.	Oxidoreductase NAD-binding domain containing 1.	0.675
ENSMZEP00005020086	tmem116	ENSMZEP00005020086	ENSMZEP00005023160	Golgi transport 1Bb.	Si:ch211-157p22.10.	0.645
ENSMZEP00005020086	umps	ENSMZEP00005020086	ENSMZEP00005002415	Golgi transport 1Bb.	Uridine monophosphate synthetase.	0.852
ENSMZEP00005020783	ENSMZEP00005020086	ENSMZEP00005020783	ENSMZEP00005020086	Dihydropyrimidinase like 5a.	Golgi transport 1Bb.	0.653
ENSMZEP00005020783	ENSMZEP00005031299	ENSMZEP00005020783	ENSMZEP00005031299	Dihydropyrimidinase like 5a.	Orotidine 5'-phosphate decarboxylase; Belongs to the OMP decarboxylase family.	0.559
ENSMZEP00005020783	ENSMZEP00005037469	ENSMZEP00005020783	ENSMZEP00005037469	Dihydropyrimidinase like 5a.	Orotidine 5'-phosphate decarboxylase; Belongs to the OMP decarboxylase family.	0.559
ENSMZEP00005020783	ENSMZEP00005037470	ENSMZEP00005020783	ENSMZEP00005037470	Dihydropyrimidinase like 5a.	Uncharacterized protein.	0.559
ENSMZEP00005020783	GOLT1B	ENSMZEP00005020783	ENSMZEP00005021354	Dihydropyrimidinase like 5a.	Golgi transport 1Ba.	0.653