STRINGSTRING
scfd1 scfd1 stx5 stx5 bet1 bet1 ykt6 ykt6 gosr2 gosr2
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
scfd1Sec1 family domain containing 1; Belongs to the STXBP/unc-18/SEC1 family. (631 aa)
stx5Syntaxin 5A; Belongs to the syntaxin family. (330 aa)
bet1Bet1 golgi vesicular membrane trafficking protein. (112 aa)
ykt6YKT6 v-SNARE homolog (S. cerevisiae); Belongs to the synaptobrevin family. (198 aa)
gosr2Golgi SNAP receptor complex member 2; Involved in transport of proteins from the cis/medial-Golgi to the trans-Golgi network. (212 aa)
Your Current Organism:
Maylandia zebra
NCBI taxonomy Id: 106582
Other names: M. zebra, Metriaclima zebra, Pseudotropheus zebra, zebra mbuna
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.