STRINGSTRING
use1 use1 LOC101480647 LOC101480647 LOC101479873 LOC101479873 LOC101483240 LOC101483240 stx18 stx18
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
use1Unconventional SNARE in the ER 1 homolog (S. cerevisiae). (254 aa)
LOC101480647SEC22 homolog B, vesicle trafficking protein a; Belongs to the synaptobrevin family. (212 aa)
LOC101479873SEC22 homolog B, vesicle trafficking protein a; Belongs to the synaptobrevin family. (215 aa)
LOC101483240BCL2 interacting protein 1a. (228 aa)
stx18Syntaxin 18. (324 aa)
Your Current Organism:
Maylandia zebra
NCBI taxonomy Id: 106582
Other names: M. zebra, Metriaclima zebra, Pseudotropheus zebra, zebra mbuna
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