22 items (Maylandia zebra) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	ENSMZEP00005001708	Uncharacterized protein. (382 aa)
	rab22a	RAB22A, member RAS oncogene family. (194 aa)
	LOC101476881	RAB5A, member RAS oncogene family, a. (216 aa)
	LOC101484912	Uncharacterized protein. (661 aa)
	vamp7	Synaptobrevin-like 1; Belongs to the synaptobrevin family. (220 aa)
	zhx2	Zinc fingers and homeoboxes 2a. (901 aa)
	rabep2	Rabaptin, RAB GTPase binding effector protein 2. (461 aa)
	gapvd1	GTPase activating protein and VPS9 domains 1. (1473 aa)
	rab24	RAB24, member RAS oncogene family. (204 aa)
	rabgef1	RAB guanine nucleotide exchange factor (GEF) 1. (504 aa)
	rabep1	Rabaptin, RAB GTPase binding effector protein 1. (844 aa)
	LOC101473430	Uncharacterized protein. (1467 aa)
	LOC101481330	RAB5A, member RAS oncogene family, b. (216 aa)
	LOC101472885	RAB guanine nucleotide exchange factor (GEF) 1, like. (504 aa)
	eea1	Early endosome antigen 1. (1395 aa)
	rab21	RAB21, member RAS oncogene family. (216 aa)
	LOC101465912	Uncharacterized protein. (222 aa)
	LOC101475520	RAB5B, member RAS oncogene family. (216 aa)
	ENSMZEP00005031203	BTB domain-containing protein. (166 aa)
	ankfy1	Ankyrin repeat and FYVE domain containing 1. (957 aa)
	ankrd27	Ankyrin repeat domain 27 (VPS9 domain). (1135 aa)
	RAB31	RAB31, member RAS oncogene family. (194 aa)

Your Current Organism:

Maylandia zebra

NCBI taxonomy Id: 106582
Other names: M. zebra, Metriaclima zebra, Pseudotropheus zebra, zebra mbuna

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structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

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node degree of proteins in your network (given the current score cut-off)

... network coordinates:

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a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSMZEP00005001708	ENSMZEP00005031203	ENSMZEP00005001708	ENSMZEP00005031203	Uncharacterized protein.	BTB domain-containing protein.	0.498
ENSMZEP00005001708	LOC101465912	ENSMZEP00005001708	ENSMZEP00005028287	Uncharacterized protein.	Uncharacterized protein.	0.959
ENSMZEP00005001708	LOC101472885	ENSMZEP00005001708	ENSMZEP00005022466	Uncharacterized protein.	RAB guanine nucleotide exchange factor (GEF) 1, like.	0.607
ENSMZEP00005001708	LOC101473430	ENSMZEP00005001708	ENSMZEP00005015902	Uncharacterized protein.	Uncharacterized protein.	0.970
ENSMZEP00005001708	LOC101475520	ENSMZEP00005001708	ENSMZEP00005028615	Uncharacterized protein.	RAB5B, member RAS oncogene family.	0.959
ENSMZEP00005001708	LOC101476881	ENSMZEP00005001708	ENSMZEP00005006743	Uncharacterized protein.	RAB5A, member RAS oncogene family, a.	0.959
ENSMZEP00005001708	LOC101481330	ENSMZEP00005001708	ENSMZEP00005021709	Uncharacterized protein.	RAB5A, member RAS oncogene family, b.	0.959
ENSMZEP00005001708	LOC101484912	ENSMZEP00005001708	ENSMZEP00005007510	Uncharacterized protein.	Uncharacterized protein.	0.969
ENSMZEP00005001708	RAB31	ENSMZEP00005001708	ENSMZEP00005032648	Uncharacterized protein.	RAB31, member RAS oncogene family.	0.959
ENSMZEP00005001708	ankfy1	ENSMZEP00005001708	ENSMZEP00005031205	Uncharacterized protein.	Ankyrin repeat and FYVE domain containing 1.	0.498
ENSMZEP00005001708	eea1	ENSMZEP00005001708	ENSMZEP00005024035	Uncharacterized protein.	Early endosome antigen 1.	0.465
ENSMZEP00005001708	rab21	ENSMZEP00005001708	ENSMZEP00005028094	Uncharacterized protein.	RAB21, member RAS oncogene family.	0.963
ENSMZEP00005001708	rab22a	ENSMZEP00005001708	ENSMZEP00005005323	Uncharacterized protein.	RAB22A, member RAS oncogene family.	0.959
ENSMZEP00005001708	rab24	ENSMZEP00005001708	ENSMZEP00005012810	Uncharacterized protein.	RAB24, member RAS oncogene family.	0.959
ENSMZEP00005001708	rabep1	ENSMZEP00005001708	ENSMZEP00005015023	Uncharacterized protein.	Rabaptin, RAB GTPase binding effector protein 1.	0.999
ENSMZEP00005001708	rabep2	ENSMZEP00005001708	ENSMZEP00005011896	Uncharacterized protein.	Rabaptin, RAB GTPase binding effector protein 2.	0.999
ENSMZEP00005001708	rabgef1	ENSMZEP00005001708	ENSMZEP00005013006	Uncharacterized protein.	RAB guanine nucleotide exchange factor (GEF) 1.	0.605
ENSMZEP00005001708	vamp7	ENSMZEP00005001708	ENSMZEP00005008705	Uncharacterized protein.	Synaptobrevin-like 1; Belongs to the synaptobrevin family.	0.660
ENSMZEP00005001708	zhx2	ENSMZEP00005001708	ENSMZEP00005009543	Uncharacterized protein.	Zinc fingers and homeoboxes 2a.	0.959
ENSMZEP00005031203	ENSMZEP00005001708	ENSMZEP00005031203	ENSMZEP00005001708	BTB domain-containing protein.	Uncharacterized protein.	0.498