15 items (Maylandia zebra) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

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experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	rbsn	Rabenosyn, RAB effector. (783 aa)
	LOC101467941	Si:ch211-266g18.9. (827 aa)
	tgfbrap1	Transforming growth factor, beta receptor associated protein 1. (872 aa)
	vps16	Vacuolar protein sorting-associated protein 16 homolog; Plays a role in vesicle-mediated protein trafficking to lysosomal compartments including the endocytic membrane transport and autophagic pathways. Believed to act as a core component of the putative HOPS and CORVET endosomal tethering complexes. Belongs to the VPS16 family. (834 aa)
	ccz1	CCZ1 homolog, vacuolar protein trafficking and biogenesis associated. (480 aa)
	vps33a	VPS33A core subunit of CORVET and HOPS complexes; Belongs to the STXBP/unc-18/SEC1 family. (618 aa)
	vps39	VPS39 subunit of HOPS complex. (876 aa)
	vps18	VPS18 core subunit of CORVET and HOPS complexes. (982 aa)
	RAB17	Uncharacterized protein. (227 aa)
	vipas39	VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog. (491 aa)
	vps33b	VPS33B late endosome and lysosome associated; Belongs to the STXBP/unc-18/SEC1 family. (616 aa)
	vps45	Vacuolar protein sorting 45 homolog; Belongs to the STXBP/unc-18/SEC1 family. (625 aa)
	vps41	Vacuolar protein sorting-associated protein 41 homolog; Plays a role in vesicle-mediated protein trafficking to lysosomal compartments including the endocytic membrane transport pathways; Belongs to the VPS41 family. (854 aa)
	vps8	VPS8 subunit of CORVET complex. (1400 aa)
	vps11	Vacuolar protein sorting-associated protein 11 homolog; Plays a role in vesicle-mediated protein trafficking to lysosomal compartments including the endocytic membrane transport and autophagic pathways. Believed to act as a core component of the putative HOPS and CORVET endosomal tethering complexes. Belongs to the VPS11 family. (937 aa)

Your Current Organism:

Maylandia zebra

NCBI taxonomy Id: 106582
Other names: M. zebra, Metriaclima zebra, Pseudotropheus zebra, zebra mbuna

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
LOC101467941	RAB17	ENSMZEP00005002469	ENSMZEP00005018210	Si:ch211-266g18.9.	Uncharacterized protein.	0.581
LOC101467941	ccz1	ENSMZEP00005002469	ENSMZEP00005011547	Si:ch211-266g18.9.	CCZ1 homolog, vacuolar protein trafficking and biogenesis associated.	0.851
LOC101467941	rbsn	ENSMZEP00005002469	ENSMZEP00005000170	Si:ch211-266g18.9.	Rabenosyn, RAB effector.	0.503
LOC101467941	vps11	ENSMZEP00005002469	ENSMZEP00005031537	Si:ch211-266g18.9.	Vacuolar protein sorting-associated protein 11 homolog; Plays a role in vesicle-mediated protein trafficking to lysosomal compartments including the endocytic membrane transport and autophagic pathways. Believed to act as a core component of the putative HOPS and CORVET endosomal tethering complexes. Belongs to the VPS11 family.	0.968
LOC101467941	vps16	ENSMZEP00005002469	ENSMZEP00005005205	Si:ch211-266g18.9.	Vacuolar protein sorting-associated protein 16 homolog; Plays a role in vesicle-mediated protein trafficking to lysosomal compartments including the endocytic membrane transport and autophagic pathways. Believed to act as a core component of the putative HOPS and CORVET endosomal tethering complexes. Belongs to the VPS16 family.	0.971
LOC101467941	vps18	ENSMZEP00005002469	ENSMZEP00005017456	Si:ch211-266g18.9.	VPS18 core subunit of CORVET and HOPS complexes.	0.967
LOC101467941	vps33a	ENSMZEP00005002469	ENSMZEP00005014598	Si:ch211-266g18.9.	VPS33A core subunit of CORVET and HOPS complexes; Belongs to the STXBP/unc-18/SEC1 family.	0.918
LOC101467941	vps33b	ENSMZEP00005002469	ENSMZEP00005021054	Si:ch211-266g18.9.	VPS33B late endosome and lysosome associated; Belongs to the STXBP/unc-18/SEC1 family.	0.918
LOC101467941	vps39	ENSMZEP00005002469	ENSMZEP00005015591	Si:ch211-266g18.9.	VPS39 subunit of HOPS complex.	0.943
LOC101467941	vps41	ENSMZEP00005002469	ENSMZEP00005024454	Si:ch211-266g18.9.	Vacuolar protein sorting-associated protein 41 homolog; Plays a role in vesicle-mediated protein trafficking to lysosomal compartments including the endocytic membrane transport pathways; Belongs to the VPS41 family.	0.960
LOC101467941	vps45	ENSMZEP00005002469	ENSMZEP00005023744	Si:ch211-266g18.9.	Vacuolar protein sorting 45 homolog; Belongs to the STXBP/unc-18/SEC1 family.	0.678
LOC101467941	vps8	ENSMZEP00005002469	ENSMZEP00005024722	Si:ch211-266g18.9.	VPS8 subunit of CORVET complex.	0.936
RAB17	LOC101467941	ENSMZEP00005018210	ENSMZEP00005002469	Uncharacterized protein.	Si:ch211-266g18.9.	0.581
RAB17	ccz1	ENSMZEP00005018210	ENSMZEP00005011547	Uncharacterized protein.	CCZ1 homolog, vacuolar protein trafficking and biogenesis associated.	0.438
RAB17	rbsn	ENSMZEP00005018210	ENSMZEP00005000170	Uncharacterized protein.	Rabenosyn, RAB effector.	0.859
RAB17	tgfbrap1	ENSMZEP00005018210	ENSMZEP00005004165	Uncharacterized protein.	Transforming growth factor, beta receptor associated protein 1.	0.581
RAB17	vps11	ENSMZEP00005018210	ENSMZEP00005031537	Uncharacterized protein.	Vacuolar protein sorting-associated protein 11 homolog; Plays a role in vesicle-mediated protein trafficking to lysosomal compartments including the endocytic membrane transport and autophagic pathways. Believed to act as a core component of the putative HOPS and CORVET endosomal tethering complexes. Belongs to the VPS11 family.	0.659
RAB17	vps16	ENSMZEP00005018210	ENSMZEP00005005205	Uncharacterized protein.	Vacuolar protein sorting-associated protein 16 homolog; Plays a role in vesicle-mediated protein trafficking to lysosomal compartments including the endocytic membrane transport and autophagic pathways. Believed to act as a core component of the putative HOPS and CORVET endosomal tethering complexes. Belongs to the VPS16 family.	0.691
RAB17	vps18	ENSMZEP00005018210	ENSMZEP00005017456	Uncharacterized protein.	VPS18 core subunit of CORVET and HOPS complexes.	0.695
RAB17	vps33a	ENSMZEP00005018210	ENSMZEP00005014598	Uncharacterized protein.	VPS33A core subunit of CORVET and HOPS complexes; Belongs to the STXBP/unc-18/SEC1 family.	0.581