STRINGSTRING
LOC101475669 LOC101475669 sp7 sp7 col1a2 col1a2 LOC101486434 LOC101486434 LOC101474919 LOC101474919 alx1 alx1 Col1a1 Col1a1 tbx3 tbx3
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
LOC101475669Collagen, type I, alpha 1b. (1333 aa)
sp7Sp7 transcription factor. (461 aa)
col1a2Collagen, type I, alpha 2. (1295 aa)
LOC101486434Cathepsin K; Belongs to the peptidase C1 family. (330 aa)
LOC101474919Bone morphogenetic protein 1a. (967 aa)
alx1ALX homeobox 1. (319 aa)
Col1a1Collagen, type I, alpha 1a. (1190 aa)
tbx3T-box transcription factor 3a. (710 aa)
Your Current Organism:
Maylandia zebra
NCBI taxonomy Id: 106582
Other names: M. zebra, Metriaclima zebra, Pseudotropheus zebra, zebra mbuna
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