21 items (Maylandia zebra) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	ENSMZEP00005002220	GRANULINS domain-containing protein. (164 aa)
	ENSMZEP00005002237	GRANULINS domain-containing protein. (148 aa)
	klhdc1	Uncharacterized protein. (395 aa)
	LOC101472279	Uncharacterized protein; Belongs to the peptidase C1 family. (356 aa)
	drg2	Developmentally regulated GTP binding protein 2. (364 aa)
	LOC101486895	Uncharacterized protein. (399 aa)
	LOC101465835	Uncharacterized protein. (207 aa)
	LOC111500504	Uncharacterized protein. (206 aa)
	grn	Granulin b. (828 aa)
	rwdd4	RWD domain containing 4. (179 aa)
	LOC101470788	Si:dkey-178e17.1; Belongs to the mitochondrial carrier (TC 2.A.29) family. (317 aa)
	LOC101477084	Uncharacterized protein. (2874 aa)
	ENSMZEP00005021672	Si:busm1-57f23.1. (145 aa)
	drg1	Developmentally regulated GTP binding protein 1. (366 aa)
	LOC101468784	Solute carrier family 25 member 1a; Belongs to the mitochondrial carrier (TC 2.A.29) family. (357 aa)
	LOC101485120	Zgc:163014. (588 aa)
	rell1	RELT like 1. (255 aa)
	lg7h15orf40	Zgc:193812. (184 aa)
	rwdd1	RWD domain containing 1. (240 aa)
	zc3h15	Zinc finger CCCH-type containing 15. (431 aa)
	ENSMZEP00005037994	Uncharacterized protein. (110 aa)

Your Current Organism:

Maylandia zebra

NCBI taxonomy Id: 106582
Other names: M. zebra, Metriaclima zebra, Pseudotropheus zebra, zebra mbuna

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structured XML interaction data, according to the 'PSI-MI' data standard

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node degree of proteins in your network (given the current score cut-off)

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a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSMZEP00005002220	drg1	ENSMZEP00005002220	ENSMZEP00005024216	GRANULINS domain-containing protein.	Developmentally regulated GTP binding protein 1.	0.505
ENSMZEP00005002220	lg7h15orf40	ENSMZEP00005002220	ENSMZEP00005030598	GRANULINS domain-containing protein.	Zgc:193812.	0.505
ENSMZEP00005002237	drg1	ENSMZEP00005002237	ENSMZEP00005024216	GRANULINS domain-containing protein.	Developmentally regulated GTP binding protein 1.	0.505
ENSMZEP00005002237	lg7h15orf40	ENSMZEP00005002237	ENSMZEP00005030598	GRANULINS domain-containing protein.	Zgc:193812.	0.505
ENSMZEP00005037994	LOC101468784	ENSMZEP00005037994	ENSMZEP00005025738	Uncharacterized protein.	Solute carrier family 25 member 1a; Belongs to the mitochondrial carrier (TC 2.A.29) family.	0.510
ENSMZEP00005037994	LOC101470788	ENSMZEP00005037994	ENSMZEP00005013634	Uncharacterized protein.	Si:dkey-178e17.1; Belongs to the mitochondrial carrier (TC 2.A.29) family.	0.510
ENSMZEP00005037994	drg1	ENSMZEP00005037994	ENSMZEP00005024216	Uncharacterized protein.	Developmentally regulated GTP binding protein 1.	0.663
ENSMZEP00005037994	lg7h15orf40	ENSMZEP00005037994	ENSMZEP00005030598	Uncharacterized protein.	Zgc:193812.	0.659
ENSMZEP00005037994	rell1	ENSMZEP00005037994	ENSMZEP00005028672	Uncharacterized protein.	RELT like 1.	0.839
ENSMZEP00005037994	rwdd1	ENSMZEP00005037994	ENSMZEP00005033677	Uncharacterized protein.	RWD domain containing 1.	0.952
ENSMZEP00005037994	rwdd4	ENSMZEP00005037994	ENSMZEP00005012017	Uncharacterized protein.	RWD domain containing 4.	0.839
ENSMZEP00005037994	zc3h15	ENSMZEP00005037994	ENSMZEP00005036595	Uncharacterized protein.	Zinc finger CCCH-type containing 15.	0.938
LOC101465835	drg1	ENSMZEP00005010327	ENSMZEP00005024216	Uncharacterized protein.	Developmentally regulated GTP binding protein 1.	0.505
LOC101465835	lg7h15orf40	ENSMZEP00005010327	ENSMZEP00005030598	Uncharacterized protein.	Zgc:193812.	0.505
LOC101468784	ENSMZEP00005037994	ENSMZEP00005025738	ENSMZEP00005037994	Solute carrier family 25 member 1a; Belongs to the mitochondrial carrier (TC 2.A.29) family.	Uncharacterized protein.	0.510
LOC101468784	drg1	ENSMZEP00005025738	ENSMZEP00005024216	Solute carrier family 25 member 1a; Belongs to the mitochondrial carrier (TC 2.A.29) family.	Developmentally regulated GTP binding protein 1.	0.659
LOC101468784	drg2	ENSMZEP00005025738	ENSMZEP00005007895	Solute carrier family 25 member 1a; Belongs to the mitochondrial carrier (TC 2.A.29) family.	Developmentally regulated GTP binding protein 2.	0.510
LOC101468784	lg7h15orf40	ENSMZEP00005025738	ENSMZEP00005030598	Solute carrier family 25 member 1a; Belongs to the mitochondrial carrier (TC 2.A.29) family.	Zgc:193812.	0.659
LOC101470788	ENSMZEP00005037994	ENSMZEP00005013634	ENSMZEP00005037994	Si:dkey-178e17.1; Belongs to the mitochondrial carrier (TC 2.A.29) family.	Uncharacterized protein.	0.510
LOC101470788	drg1	ENSMZEP00005013634	ENSMZEP00005024216	Si:dkey-178e17.1; Belongs to the mitochondrial carrier (TC 2.A.29) family.	Developmentally regulated GTP binding protein 1.	0.659