6 items (Maylandia zebra) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	pitx2	Homeobox protein. (313 aa)
	ENSMZEP00005004331	T-box transcription factor 3b. (380 aa)
	LOC101478365	Cyclic nucleotide-binding domain-containing protein. (1181 aa)
	LOC101466081	Hyperpolarization activated cyclic nucleotide-gated potassium channel 4. (1438 aa)
	LOC101479578	T-box transcription factor 18. (511 aa)
	shox2	Short stature homeobox 2. (301 aa)

Your Current Organism:

Maylandia zebra

NCBI taxonomy Id: 106582
Other names: M. zebra, Metriaclima zebra, Pseudotropheus zebra, zebra mbuna

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structured XML interaction data, according to the 'PSI-MI' data standard

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSMZEP00005004331	shox2	ENSMZEP00005004331	ENSMZEP00005021300	T-box transcription factor 3b.	Short stature homeobox 2.	0.441
LOC101466081	LOC101479578	ENSMZEP00005009714	ENSMZEP00005013750	Hyperpolarization activated cyclic nucleotide-gated potassium channel 4.	T-box transcription factor 18.	0.406
LOC101466081	shox2	ENSMZEP00005009714	ENSMZEP00005021300	Hyperpolarization activated cyclic nucleotide-gated potassium channel 4.	Short stature homeobox 2.	0.515
LOC101478365	LOC101479578	ENSMZEP00005006071	ENSMZEP00005013750	Cyclic nucleotide-binding domain-containing protein.	T-box transcription factor 18.	0.406
LOC101478365	shox2	ENSMZEP00005006071	ENSMZEP00005021300	Cyclic nucleotide-binding domain-containing protein.	Short stature homeobox 2.	0.515
LOC101479578	LOC101466081	ENSMZEP00005013750	ENSMZEP00005009714	T-box transcription factor 18.	Hyperpolarization activated cyclic nucleotide-gated potassium channel 4.	0.406
LOC101479578	LOC101478365	ENSMZEP00005013750	ENSMZEP00005006071	T-box transcription factor 18.	Cyclic nucleotide-binding domain-containing protein.	0.406
LOC101479578	shox2	ENSMZEP00005013750	ENSMZEP00005021300	T-box transcription factor 18.	Short stature homeobox 2.	0.648
shox2	ENSMZEP00005004331	ENSMZEP00005021300	ENSMZEP00005004331	Short stature homeobox 2.	T-box transcription factor 3b.	0.441
shox2	LOC101466081	ENSMZEP00005021300	ENSMZEP00005009714	Short stature homeobox 2.	Hyperpolarization activated cyclic nucleotide-gated potassium channel 4.	0.515
shox2	LOC101478365	ENSMZEP00005021300	ENSMZEP00005006071	Short stature homeobox 2.	Cyclic nucleotide-binding domain-containing protein.	0.515
shox2	LOC101479578	ENSMZEP00005021300	ENSMZEP00005013750	Short stature homeobox 2.	T-box transcription factor 18.	0.648