45 items (Maylandia zebra) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	meis2	Meis homeobox 2a. (480 aa)
	ENSMZEP00005005290	Uncharacterized protein. (289 aa)
	hoxd3	Homeobox D3a. (399 aa)
	hoxd4	Homeobox D4a. (237 aa)
	LOC101477388	Homeobox protein; Sequence-specific transcription factor which is part of a developmental regulatory system that provides cells with specific positional identities on the anterior-posterior axis. Belongs to the Abd-B homeobox family. (271 aa)
	hoxd10	Homeobox D10a. (340 aa)
	LOC101476188	Homeobox B1b. (286 aa)
	hoxb5	Homeobox B5b. (293 aa)
	LOC101478268	Homeobox B6b. (235 aa)
	pbx3	Homeobox domain-containing protein. (486 aa)
	LOC101469721	Homeobox A1a. (334 aa)
	hoxa3	Homeobox A4a. (419 aa)
	LOC101468559	Homeobox A4. (248 aa)
	HOXA7	Homeobox A7. (225 aa)
	LOC101469458	Homeobox protein; Sequence-specific transcription factor which is part of a developmental regulatory system that provides cells with specific positional identities on the anterior-posterior axis. Belongs to the Abd-B homeobox family. (264 aa)
	LOC101468068	Homeobox domain-containing protein. (378 aa)
	LOC101471971	Homeobox domain-containing protein. (429 aa)
	pknox1	Pbx/knotted 1 homeobox 1.1. (436 aa)
	LOC101483894	Homeobox domain-containing protein. (409 aa)
	LOC101483987	Pre-B-cell leukemia transcription factor 4. (381 aa)
	LOC101485124	Homeobox A10b. (349 aa)
	LOC101468140	Meis homeobox 2b. (383 aa)
	LOC101487230	Pre-B-cell leukemia homeobox 2. (403 aa)
	LOC101464381	Homeobox B13a. (317 aa)
	hoxb8	Homeobox B8a. (279 aa)
	LOC101487809	Homeobox B7a. (255 aa)
	LOC101488082	Homeobox domain-containing protein. (284 aa)
	LOC101463796	Homeobox domain-containing protein. (309 aa)
	LOC101485691	Homeobox B4a. (258 aa)
	LOC101486184	Homeobox B3a. (486 aa)
	LOC101486184-2	Homeobox B2a. (435 aa)
	LOC101485412	Homeobox B1a. (361 aa)
	pknox2	Pbx/knotted 1 homeobox 2. (488 aa)
	LOC101464457	Pre-B-cell leukemia homeobox 1a. (428 aa)
	LOC101476262	Homeobox domain-containing protein. (295 aa)
	hoxc4	Homeobox C4a. (265 aa)
	hoxc5	Homeobox C5a. (227 aa)
	hoxc6	Homeobox C6a. (234 aa)
	hoxc8	Homeobox C8a. (250 aa)
	hoxc9	Homeobox protein; Sequence-specific transcription factor which is part of a developmental regulatory system that provides cells with specific positional identities on the anterior-posterior axis. Belongs to the Abd-B homeobox family. (262 aa)
	LOC101470732	Homeobox C10a. (330 aa)
	LOC101476901	Homeobox protein; Sequence-specific transcription factor which is part of a developmental regulatory system that provides cells with specific positional identities on the anterior-posterior axis. Belongs to the Abd-B homeobox family. (309 aa)
	ENSMZEP00005036626	Homeobox domain-containing protein. (105 aa)
	LOC101464894	Meis homeobox 1 b. (470 aa)
	LOC101481575	Myeloid ecotropic viral integration site 3. (420 aa)

Your Current Organism:

Maylandia zebra

NCBI taxonomy Id: 106582
Other names: M. zebra, Metriaclima zebra, Pseudotropheus zebra, zebra mbuna

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SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

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TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

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TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

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structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

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node degree of proteins in your network (given the current score cut-off)

... network coordinates:

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a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSMZEP00005005290	ENSMZEP00005036626	ENSMZEP00005005290	ENSMZEP00005036626	Uncharacterized protein.	Homeobox domain-containing protein.	0.514
ENSMZEP00005005290	HOXA7	ENSMZEP00005005290	ENSMZEP00005013570	Uncharacterized protein.	Homeobox A7.	0.471
ENSMZEP00005005290	LOC101463796	ENSMZEP00005005290	ENSMZEP00005030940	Uncharacterized protein.	Homeobox domain-containing protein.	0.640
ENSMZEP00005005290	LOC101464894	ENSMZEP00005005290	ENSMZEP00005036660	Uncharacterized protein.	Meis homeobox 1 b.	0.680
ENSMZEP00005005290	LOC101468140	ENSMZEP00005005290	ENSMZEP00005019783	Uncharacterized protein.	Meis homeobox 2b.	0.680
ENSMZEP00005005290	LOC101468559	ENSMZEP00005005290	ENSMZEP00005013527	Uncharacterized protein.	Homeobox A4.	0.514
ENSMZEP00005005290	LOC101469458	ENSMZEP00005005290	ENSMZEP00005013578	Uncharacterized protein.	Homeobox protein; Sequence-specific transcription factor which is part of a developmental regulatory system that provides cells with specific positional identities on the anterior-posterior axis. Belongs to the Abd-B homeobox family.	0.527
ENSMZEP00005005290	LOC101469721	ENSMZEP00005005290	ENSMZEP00005013448	Uncharacterized protein.	Homeobox A1a.	0.634
ENSMZEP00005005290	LOC101476188	ENSMZEP00005005290	ENSMZEP00005010851	Uncharacterized protein.	Homeobox B1b.	0.708
ENSMZEP00005005290	LOC101476262	ENSMZEP00005005290	ENSMZEP00005036411	Uncharacterized protein.	Homeobox domain-containing protein.	0.648
ENSMZEP00005005290	LOC101478268	ENSMZEP00005005290	ENSMZEP00005010884	Uncharacterized protein.	Homeobox B6b.	0.577
ENSMZEP00005005290	LOC101481575	ENSMZEP00005005290	ENSMZEP00005036903	Uncharacterized protein.	Myeloid ecotropic viral integration site 3.	0.548
ENSMZEP00005005290	LOC101483894	ENSMZEP00005005290	ENSMZEP00005018553	Uncharacterized protein.	Homeobox domain-containing protein.	0.675
ENSMZEP00005005290	LOC101485412	ENSMZEP00005005290	ENSMZEP00005030967	Uncharacterized protein.	Homeobox B1a.	0.708
ENSMZEP00005005290	LOC101486184	ENSMZEP00005005290	ENSMZEP00005030948	Uncharacterized protein.	Homeobox B3a.	0.410
ENSMZEP00005005290	LOC101486184-2	ENSMZEP00005005290	ENSMZEP00005030953	Uncharacterized protein.	Homeobox B2a.	0.420
ENSMZEP00005005290	LOC101487809	ENSMZEP00005005290	ENSMZEP00005030935	Uncharacterized protein.	Homeobox B7a.	0.604
ENSMZEP00005005290	LOC101488082	ENSMZEP00005005290	ENSMZEP00005030937	Uncharacterized protein.	Homeobox domain-containing protein.	0.577
ENSMZEP00005005290	hoxa3	ENSMZEP00005005290	ENSMZEP00005013517	Uncharacterized protein.	Homeobox A4a.	0.437
ENSMZEP00005005290	hoxb5	ENSMZEP00005005290	ENSMZEP00005010875	Uncharacterized protein.	Homeobox B5b.	0.640