6 items (Maylandia zebra) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	hoxd3	Homeobox D3a. (399 aa)
	hoxd4	Homeobox D4a. (237 aa)
	LOC101477388	Homeobox protein; Sequence-specific transcription factor which is part of a developmental regulatory system that provides cells with specific positional identities on the anterior-posterior axis. Belongs to the Abd-B homeobox family. (271 aa)
	hoxd10	Homeobox D10a. (340 aa)
	LOC101470732	Homeobox C10a. (330 aa)
	LOC101476901	Homeobox protein; Sequence-specific transcription factor which is part of a developmental regulatory system that provides cells with specific positional identities on the anterior-posterior axis. Belongs to the Abd-B homeobox family. (309 aa)

Your Current Organism:

Maylandia zebra

NCBI taxonomy Id: 106582
Other names: M. zebra, Metriaclima zebra, Pseudotropheus zebra, zebra mbuna

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structured XML interaction data, according to the 'PSI-MI' data standard

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node degree of proteins in your network (given the current score cut-off)

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a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
LOC101470732	LOC101476901	ENSMZEP00005036418	ENSMZEP00005036625	Homeobox C10a.	Homeobox protein; Sequence-specific transcription factor which is part of a developmental regulatory system that provides cells with specific positional identities on the anterior-posterior axis. Belongs to the Abd-B homeobox family.	0.559
LOC101470732	LOC101477388	ENSMZEP00005036418	ENSMZEP00005006089	Homeobox C10a.	Homeobox protein; Sequence-specific transcription factor which is part of a developmental regulatory system that provides cells with specific positional identities on the anterior-posterior axis. Belongs to the Abd-B homeobox family.	0.559
LOC101470732	hoxd3	ENSMZEP00005036418	ENSMZEP00005006046	Homeobox C10a.	Homeobox D3a.	0.432
LOC101476901	LOC101470732	ENSMZEP00005036625	ENSMZEP00005036418	Homeobox protein; Sequence-specific transcription factor which is part of a developmental regulatory system that provides cells with specific positional identities on the anterior-posterior axis. Belongs to the Abd-B homeobox family.	Homeobox C10a.	0.559
LOC101476901	hoxd10	ENSMZEP00005036625	ENSMZEP00005006108	Homeobox protein; Sequence-specific transcription factor which is part of a developmental regulatory system that provides cells with specific positional identities on the anterior-posterior axis. Belongs to the Abd-B homeobox family.	Homeobox D10a.	0.655
LOC101476901	hoxd3	ENSMZEP00005036625	ENSMZEP00005006046	Homeobox protein; Sequence-specific transcription factor which is part of a developmental regulatory system that provides cells with specific positional identities on the anterior-posterior axis. Belongs to the Abd-B homeobox family.	Homeobox D3a.	0.483
LOC101476901	hoxd4	ENSMZEP00005036625	ENSMZEP00005006082	Homeobox protein; Sequence-specific transcription factor which is part of a developmental regulatory system that provides cells with specific positional identities on the anterior-posterior axis. Belongs to the Abd-B homeobox family.	Homeobox D4a.	0.429
LOC101477388	LOC101470732	ENSMZEP00005006089	ENSMZEP00005036418	Homeobox protein; Sequence-specific transcription factor which is part of a developmental regulatory system that provides cells with specific positional identities on the anterior-posterior axis. Belongs to the Abd-B homeobox family.	Homeobox C10a.	0.559
LOC101477388	hoxd10	ENSMZEP00005006089	ENSMZEP00005006108	Homeobox protein; Sequence-specific transcription factor which is part of a developmental regulatory system that provides cells with specific positional identities on the anterior-posterior axis. Belongs to the Abd-B homeobox family.	Homeobox D10a.	0.655
LOC101477388	hoxd3	ENSMZEP00005006089	ENSMZEP00005006046	Homeobox protein; Sequence-specific transcription factor which is part of a developmental regulatory system that provides cells with specific positional identities on the anterior-posterior axis. Belongs to the Abd-B homeobox family.	Homeobox D3a.	0.483
LOC101477388	hoxd4	ENSMZEP00005006089	ENSMZEP00005006082	Homeobox protein; Sequence-specific transcription factor which is part of a developmental regulatory system that provides cells with specific positional identities on the anterior-posterior axis. Belongs to the Abd-B homeobox family.	Homeobox D4a.	0.429
hoxd10	LOC101476901	ENSMZEP00005006108	ENSMZEP00005036625	Homeobox D10a.	Homeobox protein; Sequence-specific transcription factor which is part of a developmental regulatory system that provides cells with specific positional identities on the anterior-posterior axis. Belongs to the Abd-B homeobox family.	0.655
hoxd10	LOC101477388	ENSMZEP00005006108	ENSMZEP00005006089	Homeobox D10a.	Homeobox protein; Sequence-specific transcription factor which is part of a developmental regulatory system that provides cells with specific positional identities on the anterior-posterior axis. Belongs to the Abd-B homeobox family.	0.655
hoxd10	hoxd3	ENSMZEP00005006108	ENSMZEP00005006046	Homeobox D10a.	Homeobox D3a.	0.461
hoxd3	LOC101470732	ENSMZEP00005006046	ENSMZEP00005036418	Homeobox D3a.	Homeobox C10a.	0.432
hoxd3	LOC101476901	ENSMZEP00005006046	ENSMZEP00005036625	Homeobox D3a.	Homeobox protein; Sequence-specific transcription factor which is part of a developmental regulatory system that provides cells with specific positional identities on the anterior-posterior axis. Belongs to the Abd-B homeobox family.	0.483
hoxd3	LOC101477388	ENSMZEP00005006046	ENSMZEP00005006089	Homeobox D3a.	Homeobox protein; Sequence-specific transcription factor which is part of a developmental regulatory system that provides cells with specific positional identities on the anterior-posterior axis. Belongs to the Abd-B homeobox family.	0.483
hoxd3	hoxd10	ENSMZEP00005006046	ENSMZEP00005006108	Homeobox D3a.	Homeobox D10a.	0.461
hoxd3	hoxd4	ENSMZEP00005006046	ENSMZEP00005006082	Homeobox D3a.	Homeobox D4a.	0.939
hoxd4	LOC101476901	ENSMZEP00005006082	ENSMZEP00005036625	Homeobox D4a.	Homeobox protein; Sequence-specific transcription factor which is part of a developmental regulatory system that provides cells with specific positional identities on the anterior-posterior axis. Belongs to the Abd-B homeobox family.	0.429