24 items (Maylandia zebra) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	ENSMZEP00005000180	Uncharacterized protein. (380 aa)
	ENSMZEP00005000240	Period_C domain-containing protein. (522 aa)
	LOC101475237	Cryptochrome circadian regulator 1a. (630 aa)
	CSNK1D	Casein kinase 1 delta; Belongs to the protein kinase superfamily. (407 aa)
	csnk1e	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily. (417 aa)
	LOC101474441	Cryptochrome circadian regulator 5. (518 aa)
	ENSMZEP00005013531	Uncharacterized protein. (70 aa)
	LOC101465128	Aryl hydrocarbon receptor nuclear translocator-like 1a. (602 aa)
	ARNTL2	Aryl hydrocarbon receptor nuclear translocator like 2. (541 aa)
	LOC101475433	Neuronal PAS domain protein 2. (872 aa)
	LOC101466601	Cryptochrome circadian regulator 1b. (570 aa)
	bhlhe41	Basic helix-loop-helix family, member e41. (430 aa)
	LOC101470055	Aryl hydrocarbon receptor nuclear translocator-like 2. (638 aa)
	LOC101484527	Casein kinase 1, epsilon; Belongs to the protein kinase superfamily. (420 aa)
	LOC101467593	Si:ch1073-390k14.1. (840 aa)
	CLOCK	Clock circadian regulator a. (790 aa)
	per1	Period circadian clock 1b. (1417 aa)
	LOC101479865	Period circadian clock 3. (1234 aa)
	LOC101486037	Cryptochrome circadian regulator 2. (673 aa)
	LOC101481514	Casein kinase 1 delta; Belongs to the protein kinase superfamily. (404 aa)
	LOC101478070	Clock circadian regulator b. (882 aa)
	LOC101485591	Period circadian clock 2. (1437 aa)
	LOC101480452	Cryptochrome circadian regulator 3a. (654 aa)
	PER2	Period circadian regulator 2. (1491 aa)

Your Current Organism:

Maylandia zebra

NCBI taxonomy Id: 106582
Other names: M. zebra, Metriaclima zebra, Pseudotropheus zebra, zebra mbuna

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structured XML interaction data, according to the 'PSI-MI' data standard

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node degree of proteins in your network (given the current score cut-off)

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a flat-file format describing the coordinates and colors of nodes in the network

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ARNTL2	CLOCK	ENSMZEP00005019973	ENSMZEP00005027083	Aryl hydrocarbon receptor nuclear translocator like 2.	Clock circadian regulator a.	0.841
ARNTL2	CSNK1D	ENSMZEP00005019973	ENSMZEP00005003911	Aryl hydrocarbon receptor nuclear translocator like 2.	Casein kinase 1 delta; Belongs to the protein kinase superfamily.	0.645
ARNTL2	ENSMZEP00005000180	ENSMZEP00005019973	ENSMZEP00005000180	Aryl hydrocarbon receptor nuclear translocator like 2.	Uncharacterized protein.	0.606
ARNTL2	ENSMZEP00005000240	ENSMZEP00005019973	ENSMZEP00005000240	Aryl hydrocarbon receptor nuclear translocator like 2.	Period_C domain-containing protein.	0.606
ARNTL2	ENSMZEP00005013531	ENSMZEP00005019973	ENSMZEP00005013531	Aryl hydrocarbon receptor nuclear translocator like 2.	Uncharacterized protein.	0.730
ARNTL2	LOC101466601	ENSMZEP00005019973	ENSMZEP00005022994	Aryl hydrocarbon receptor nuclear translocator like 2.	Cryptochrome circadian regulator 1b.	0.625
ARNTL2	LOC101467593	ENSMZEP00005019973	ENSMZEP00005026771	Aryl hydrocarbon receptor nuclear translocator like 2.	Si:ch1073-390k14.1.	0.670
ARNTL2	LOC101474441	ENSMZEP00005019973	ENSMZEP00005011832	Aryl hydrocarbon receptor nuclear translocator like 2.	Cryptochrome circadian regulator 5.	0.654
ARNTL2	LOC101475237	ENSMZEP00005019973	ENSMZEP00005001769	Aryl hydrocarbon receptor nuclear translocator like 2.	Cryptochrome circadian regulator 1a.	0.625
ARNTL2	LOC101475433	ENSMZEP00005019973	ENSMZEP00005020229	Aryl hydrocarbon receptor nuclear translocator like 2.	Neuronal PAS domain protein 2.	0.841
ARNTL2	LOC101478070	ENSMZEP00005019973	ENSMZEP00005031946	Aryl hydrocarbon receptor nuclear translocator like 2.	Clock circadian regulator b.	0.841
ARNTL2	LOC101479865	ENSMZEP00005019973	ENSMZEP00005029056	Aryl hydrocarbon receptor nuclear translocator like 2.	Period circadian clock 3.	0.606
ARNTL2	LOC101480452	ENSMZEP00005019973	ENSMZEP00005035893	Aryl hydrocarbon receptor nuclear translocator like 2.	Cryptochrome circadian regulator 3a.	0.710
ARNTL2	LOC101481514	ENSMZEP00005019973	ENSMZEP00005031055	Aryl hydrocarbon receptor nuclear translocator like 2.	Casein kinase 1 delta; Belongs to the protein kinase superfamily.	0.645
ARNTL2	LOC101484527	ENSMZEP00005019973	ENSMZEP00005025888	Aryl hydrocarbon receptor nuclear translocator like 2.	Casein kinase 1, epsilon; Belongs to the protein kinase superfamily.	0.645
ARNTL2	LOC101485591	ENSMZEP00005019973	ENSMZEP00005034021	Aryl hydrocarbon receptor nuclear translocator like 2.	Period circadian clock 2.	0.606
ARNTL2	LOC101486037	ENSMZEP00005019973	ENSMZEP00005030679	Aryl hydrocarbon receptor nuclear translocator like 2.	Cryptochrome circadian regulator 2.	0.670
ARNTL2	PER2	ENSMZEP00005019973	ENSMZEP00005036880	Aryl hydrocarbon receptor nuclear translocator like 2.	Period circadian regulator 2.	0.606
ARNTL2	bhlhe41	ENSMZEP00005019973	ENSMZEP00005023973	Aryl hydrocarbon receptor nuclear translocator like 2.	Basic helix-loop-helix family, member e41.	0.455
ARNTL2	csnk1e	ENSMZEP00005019973	ENSMZEP00005007635	Aryl hydrocarbon receptor nuclear translocator like 2.	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.	0.645