37 items (Maylandia zebra) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	rps2	Ribosomal protein S2; Belongs to the universal ribosomal protein uS5 family. (279 aa)
	rpl27	60S ribosomal protein L27; Belongs to the eukaryotic ribosomal protein eL27 family. (144 aa)
	rps10	Ribosomal protein S10. (190 aa)
	RPL7A	Ribosomal protein L7a. (281 aa)
	rpl30	Ribosomal protein L30. (116 aa)
	rps28	Ribosomal protein S28. (69 aa)
	rps27a	Ribosomal protein S27a. (192 aa)
	rpl13a	Ribosomal protein L13a; Belongs to the universal ribosomal protein uL13 family. (218 aa)
	LOC101467350	Ribosomal protein L36A; Belongs to the eukaryotic ribosomal protein eL42 family. (113 aa)
	Rps26	40S ribosomal protein S26; Belongs to the eukaryotic ribosomal protein eS26 family. (116 aa)
	LOC101484456	Ribosomal protein L26. (145 aa)
	rpl6	Ribosomal protein L6. (295 aa)
	rpl37a	Ribosomal protein L37a. (90 aa)
	rps13	Ribosomal protein S13; Belongs to the universal ribosomal protein uS15 family. (151 aa)
	rps29	Ribosomal protein S29. (56 aa)
	RPL27A	Ribosomal protein L27a; Belongs to the universal ribosomal protein uL15 family. (195 aa)
	rps25	40S ribosomal protein S25; Belongs to the eukaryotic ribosomal protein eS25 family. (135 aa)
	rps23	Ribosomal protein S23; Belongs to the universal ribosomal protein uS12 family. (143 aa)
	rps12	40S ribosomal protein S12; Belongs to the eukaryotic ribosomal protein eS12 family. (157 aa)
	rpl15	Ribosomal protein L15; Belongs to the eukaryotic ribosomal protein eL15 family. (204 aa)
	rpl36	60S ribosomal protein L36; Belongs to the eukaryotic ribosomal protein eL36 family. (105 aa)
	rps4x	40S ribosomal protein S4; Belongs to the eukaryotic ribosomal protein eS4 family. (263 aa)
	rpl8	Ribosomal protein L8. (257 aa)
	rpl21	Ribosomal protein L21. (160 aa)
	rpl24	Ribosomal protein L24. (157 aa)
	rps11	Ribosomal protein S11; Belongs to the universal ribosomal protein uS17 family. (161 aa)
	rps6	40S ribosomal protein S6; Belongs to the eukaryotic ribosomal protein eS6 family. (249 aa)
	rpl4	Ribosomal protein L4. (369 aa)
	rpl17	Ribosomal protein L17; Belongs to the universal ribosomal protein uL22 family. (187 aa)
	rpl32	Ribosomal protein L32. (135 aa)
	rpl9	Ribosomal protein L9. (260 aa)
	rps8	40S ribosomal protein S8; Belongs to the eukaryotic ribosomal protein eS8 family. (208 aa)
	rps3	Ribosomal protein S3; Belongs to the universal ribosomal protein uS3 family. (277 aa)
	rpl11	Ribosomal protein L11; Belongs to the universal ribosomal protein uL5 family. (177 aa)
	rps5	Ribosomal protein S5; Belongs to the universal ribosomal protein uS7 family. (203 aa)
	rps18	Ribosomal protein S18; Belongs to the universal ribosomal protein uS13 family. (152 aa)
	rps24	40S ribosomal protein S24; Belongs to the eukaryotic ribosomal protein eS24 family. (178 aa)

Your Current Organism:

Maylandia zebra

NCBI taxonomy Id: 106582
Other names: M. zebra, Metriaclima zebra, Pseudotropheus zebra, zebra mbuna

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structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

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node degree of proteins in your network (given the current score cut-off)

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a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
LOC101467350	LOC101484456	ENSMZEP00005011396	ENSMZEP00005011860	Ribosomal protein L36A; Belongs to the eukaryotic ribosomal protein eL42 family.	Ribosomal protein L26.	0.999
LOC101467350	RPL27A	ENSMZEP00005011396	ENSMZEP00005016709	Ribosomal protein L36A; Belongs to the eukaryotic ribosomal protein eL42 family.	Ribosomal protein L27a; Belongs to the universal ribosomal protein uL15 family.	0.999
LOC101467350	RPL7A	ENSMZEP00005011396	ENSMZEP00005004169	Ribosomal protein L36A; Belongs to the eukaryotic ribosomal protein eL42 family.	Ribosomal protein L7a.	0.999
LOC101467350	Rps26	ENSMZEP00005011396	ENSMZEP00005011521	Ribosomal protein L36A; Belongs to the eukaryotic ribosomal protein eL42 family.	40S ribosomal protein S26; Belongs to the eukaryotic ribosomal protein eS26 family.	0.999
LOC101467350	rpl11	ENSMZEP00005011396	ENSMZEP00005034907	Ribosomal protein L36A; Belongs to the eukaryotic ribosomal protein eL42 family.	Ribosomal protein L11; Belongs to the universal ribosomal protein uL5 family.	0.999
LOC101467350	rpl13a	ENSMZEP00005011396	ENSMZEP00005006418	Ribosomal protein L36A; Belongs to the eukaryotic ribosomal protein eL42 family.	Ribosomal protein L13a; Belongs to the universal ribosomal protein uL13 family.	0.999
LOC101467350	rpl15	ENSMZEP00005011396	ENSMZEP00005022750	Ribosomal protein L36A; Belongs to the eukaryotic ribosomal protein eL42 family.	Ribosomal protein L15; Belongs to the eukaryotic ribosomal protein eL15 family.	0.999
LOC101467350	rpl17	ENSMZEP00005011396	ENSMZEP00005031231	Ribosomal protein L36A; Belongs to the eukaryotic ribosomal protein eL42 family.	Ribosomal protein L17; Belongs to the universal ribosomal protein uL22 family.	0.999
LOC101467350	rpl21	ENSMZEP00005011396	ENSMZEP00005029374	Ribosomal protein L36A; Belongs to the eukaryotic ribosomal protein eL42 family.	Ribosomal protein L21.	0.999
LOC101467350	rpl24	ENSMZEP00005011396	ENSMZEP00005029765	Ribosomal protein L36A; Belongs to the eukaryotic ribosomal protein eL42 family.	Ribosomal protein L24.	0.999
LOC101467350	rpl27	ENSMZEP00005011396	ENSMZEP00005002289	Ribosomal protein L36A; Belongs to the eukaryotic ribosomal protein eL42 family.	60S ribosomal protein L27; Belongs to the eukaryotic ribosomal protein eL27 family.	0.999
LOC101467350	rpl30	ENSMZEP00005011396	ENSMZEP00005004328	Ribosomal protein L36A; Belongs to the eukaryotic ribosomal protein eL42 family.	Ribosomal protein L30.	0.999
LOC101467350	rpl32	ENSMZEP00005011396	ENSMZEP00005031687	Ribosomal protein L36A; Belongs to the eukaryotic ribosomal protein eL42 family.	Ribosomal protein L32.	0.999
LOC101467350	rpl36	ENSMZEP00005011396	ENSMZEP00005024001	Ribosomal protein L36A; Belongs to the eukaryotic ribosomal protein eL42 family.	60S ribosomal protein L36; Belongs to the eukaryotic ribosomal protein eL36 family.	0.999
LOC101467350	rpl37a	ENSMZEP00005011396	ENSMZEP00005014902	Ribosomal protein L36A; Belongs to the eukaryotic ribosomal protein eL42 family.	Ribosomal protein L37a.	0.999
LOC101467350	rpl4	ENSMZEP00005011396	ENSMZEP00005030391	Ribosomal protein L36A; Belongs to the eukaryotic ribosomal protein eL42 family.	Ribosomal protein L4.	0.999
LOC101467350	rpl6	ENSMZEP00005011396	ENSMZEP00005013245	Ribosomal protein L36A; Belongs to the eukaryotic ribosomal protein eL42 family.	Ribosomal protein L6.	0.999
LOC101467350	rpl8	ENSMZEP00005011396	ENSMZEP00005028800	Ribosomal protein L36A; Belongs to the eukaryotic ribosomal protein eL42 family.	Ribosomal protein L8.	0.999
LOC101467350	rpl9	ENSMZEP00005011396	ENSMZEP00005031787	Ribosomal protein L36A; Belongs to the eukaryotic ribosomal protein eL42 family.	Ribosomal protein L9.	0.999
LOC101467350	rps10	ENSMZEP00005011396	ENSMZEP00005002915	Ribosomal protein L36A; Belongs to the eukaryotic ribosomal protein eL42 family.	Ribosomal protein S10.	0.999