STRINGSTRING
lysmd2 lysmd2 lysmd1 lysmd1 lysmd3 lysmd3 LOC101475751 LOC101475751 fam174b fam174b
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
lysmd2LysM, putative peptidoglycan-binding, domain containing 2. (215 aa)
lysmd1LysM, putative peptidoglycan-binding, domain containing 1. (237 aa)
lysmd3LysM, putative peptidoglycan-binding, domain containing 3. (319 aa)
LOC101475751LysM, putative peptidoglycan-binding, domain containing 4. (272 aa)
fam174bFamily with sequence similarity 174 member B. (151 aa)
Your Current Organism:
Maylandia zebra
NCBI taxonomy Id: 106582
Other names: M. zebra, Metriaclima zebra, Pseudotropheus zebra, zebra mbuna
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