(8 nodes) LsmAD domain, and Roquin II network (Maylandia zebra)

Nodes:

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second shell of interactors

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proteins of unknown 3D structure

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a 3D structure is known or predicted

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Known Interactions

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experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	LOC101484066	Ataxin 2-like. (888 aa)
	helz	Helicase with zinc finger. (2024 aa)
	lsm12	LSM12 homolog b. (196 aa)
	atxn2	Ataxin 2. (1053 aa)
	LOC101482910	LsmAD domain-containing protein. (1051 aa)
	LOC101467216	Ring finger and CCCH-type domains 2. (1141 aa)
	fam98a	Uncharacterized protein. (489 aa)
	rc3h1	Ring finger and CCCH-type domains 1b. (1125 aa)

Your Current Organism:

Maylandia zebra

NCBI taxonomy Id: 106582
Other names: M. zebra, Metriaclima zebra, Pseudotropheus zebra, zebra mbuna

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
LOC101467216	LOC101482910	ENSMZEP00005022732	ENSMZEP00005018469	Ring finger and CCCH-type domains 2.	LsmAD domain-containing protein.	0.509
LOC101467216	LOC101484066	ENSMZEP00005022732	ENSMZEP00005001570	Ring finger and CCCH-type domains 2.	Ataxin 2-like.	0.509
LOC101467216	atxn2	ENSMZEP00005022732	ENSMZEP00005011268	Ring finger and CCCH-type domains 2.	Ataxin 2.	0.482
LOC101467216	helz	ENSMZEP00005022732	ENSMZEP00005002461	Ring finger and CCCH-type domains 2.	Helicase with zinc finger.	0.713
LOC101467216	rc3h1	ENSMZEP00005022732	ENSMZEP00005034135	Ring finger and CCCH-type domains 2.	Ring finger and CCCH-type domains 1b.	0.736
LOC101482910	LOC101467216	ENSMZEP00005018469	ENSMZEP00005022732	LsmAD domain-containing protein.	Ring finger and CCCH-type domains 2.	0.509
LOC101482910	fam98a	ENSMZEP00005018469	ENSMZEP00005025147	LsmAD domain-containing protein.	Uncharacterized protein.	0.468
LOC101482910	helz	ENSMZEP00005018469	ENSMZEP00005002461	LsmAD domain-containing protein.	Helicase with zinc finger.	0.458
LOC101482910	lsm12	ENSMZEP00005018469	ENSMZEP00005007517	LsmAD domain-containing protein.	LSM12 homolog b.	0.905
LOC101484066	LOC101467216	ENSMZEP00005001570	ENSMZEP00005022732	Ataxin 2-like.	Ring finger and CCCH-type domains 2.	0.509
LOC101484066	fam98a	ENSMZEP00005001570	ENSMZEP00005025147	Ataxin 2-like.	Uncharacterized protein.	0.468
LOC101484066	helz	ENSMZEP00005001570	ENSMZEP00005002461	Ataxin 2-like.	Helicase with zinc finger.	0.458
LOC101484066	lsm12	ENSMZEP00005001570	ENSMZEP00005007517	Ataxin 2-like.	LSM12 homolog b.	0.905
atxn2	LOC101467216	ENSMZEP00005011268	ENSMZEP00005022732	Ataxin 2.	Ring finger and CCCH-type domains 2.	0.482
atxn2	fam98a	ENSMZEP00005011268	ENSMZEP00005025147	Ataxin 2.	Uncharacterized protein.	0.661
atxn2	lsm12	ENSMZEP00005011268	ENSMZEP00005007517	Ataxin 2.	LSM12 homolog b.	0.905
atxn2	rc3h1	ENSMZEP00005011268	ENSMZEP00005034135	Ataxin 2.	Ring finger and CCCH-type domains 1b.	0.457
fam98a	LOC101482910	ENSMZEP00005025147	ENSMZEP00005018469	Uncharacterized protein.	LsmAD domain-containing protein.	0.468
fam98a	LOC101484066	ENSMZEP00005025147	ENSMZEP00005001570	Uncharacterized protein.	Ataxin 2-like.	0.468
fam98a	atxn2	ENSMZEP00005025147	ENSMZEP00005011268	Uncharacterized protein.	Ataxin 2.	0.661