STRINGSTRING
zmpste24 zmpste24 ENSMZEP00005000936 ENSMZEP00005000936 rnf8 rnf8 LOC101485808 LOC101485808 ENSMZEP00005001914 ENSMZEP00005001914 mfsd11 mfsd11 lig4 lig4 LOC112432380 LOC112432380 rhno1 rhno1 msh2 msh2 LOC101472093 LOC101472093 Rad9b Rad9b rnf168 rnf168 rad9a rad9a atr atr kdm1a kdm1a ercc6 ercc6 cdca7 cdca7 ikbip ikbip map3k20 map3k20 men1 men1 itgb6 itgb6 Itgb6 Itgb6 ercc8 ercc8 fbxo4 fbxo4 tank tank LOC105941156 LOC105941156 cdca7l cdca7l LOC101485000 LOC101485000 xrcc5 xrcc5 LOC101486342 LOC101486342 ENSMZEP00005012187 ENSMZEP00005012187 babam2 babam2 ercc1 ercc1 LOC101476906 LOC101476906 GADD45A GADD45A fancd2 fancd2 ENSMZEP00005014399 ENSMZEP00005014399 dcun1d3 dcun1d3 sfrp2 sfrp2 sirt1 sirt1 brca2 brca2 ENSMZEP00005015265 ENSMZEP00005015265 ect2 ect2 ticrr ticrr LOC101481251 LOC101481251 brat1 brat1 ints3 ints3 ENSMZEP00005016530 ENSMZEP00005016530 Atm Atm rad51 rad51 ENSMZEP00005017141 ENSMZEP00005017141 ino80 ino80 ENSMZEP00005018137 ENSMZEP00005018137 Brcc3 Brcc3 kars1 kars1 xrcc4 xrcc4 cop1 cop1 ENSMZEP00005020665 ENSMZEP00005020665 rfwd3 rfwd3 tp53bp1 tp53bp1 LOC101477392 LOC101477392 LOC101476025 LOC101476025 INIP INIP LOC101484052 LOC101484052 swi5 swi5 LOC112430600 LOC112430600 topbp1 topbp1 LOC101483818 LOC101483818 ptprc ptprc babam1 babam1 smpd1 smpd1 rad1 rad1 LOC101477921 LOC101477921 XRCC2 XRCC2 chek2 chek2 brca1 brca1 blm blm LOC101485820 LOC101485820 bax bax ENSMZEP00005031749 ENSMZEP00005031749 LOC101482089 LOC101482089 LOC101473892 LOC101473892 uimc1 uimc1 spidr spidr bcl2 bcl2 stk11 stk11 LOC101481520 LOC101481520 abcg5 abcg5 xrcc6 xrcc6 eya3 eya3
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
zmpste24CAAX prenyl protease; Proteolytically removes the C-terminal three residues of farnesylated proteins; Belongs to the peptidase M48A family. (467 aa)
ENSMZEP00005000936Uncharacterized protein. (168 aa)
rnf8E3 ubiquitin-protein ligase RNF8; E3 ubiquitin-protein ligase that plays a key role in DNA damage signaling via 2 distinct roles: by mediating the 'Lys-63'-linked ubiquitination of histones H2A and H2AX and promoting the recruitment of DNA repair proteins at double-strand breaks (DSBs) sites, and by catalyzing 'Lys-48'-linked ubiquitination to remove target proteins from DNA damage sites. Following DNA DSBs, it is recruited to the sites of damage by ATM-phosphorylated MDC1 and catalyzes the 'Lys-63'-linked ubiquitination of histones H2A and H2AX, thereby promoting the formation of TP53 [...] (544 aa)
LOC101485808Uncharacterized protein. (183 aa)
ENSMZEP00005001914Reverse transcriptase domain-containing protein. (1007 aa)
mfsd11Major facilitator superfamily domain containing 11. (454 aa)
lig4DNA ligase. (910 aa)
LOC112432380Uncharacterized protein. (204 aa)
rhno1Uncharacterized protein. (295 aa)
msh2DNA mismatch repair protein; Component of the post-replicative DNA mismatch repair system (MMR). (937 aa)
LOC101472093Protein kinase domain-containing protein. (668 aa)
Rad9bUncharacterized protein. (124 aa)
rnf168E3 ubiquitin-protein ligase RNF168; E3 ubiquitin-protein ligase required for accumulation of repair proteins to sites of DNA damage. Acts with UBE2N/UBC13 to amplify the RNF8-dependent histone ubiquitination. Recruited to sites of DNA damage at double-strand breaks (DSBs) by binding to ubiquitinated histone H2A and ubiquitinates histone H2A and H2AX, leading to amplify the RNF8-dependent H2A ubiquitination and promoting the formation of 'Lys-63'-linked ubiquitin conjugates. This leads to concentrate ubiquitinated histones H2A and H2AX at DNA lesions to the threshold required for recrui [...] (430 aa)
rad9aCell cycle checkpoint control protein; Belongs to the rad9 family. (389 aa)
atrATR serine/threonine kinase; Belongs to the PI3/PI4-kinase family. (2554 aa)
kdm1aLysine-specific histone demethylase; Histone demethylase that demethylates both 'Lys-4' (H3K4me) and 'Lys-9' (H3K9me) of histone H3, thereby acting as a coactivator or a corepressor, depending on the context. Acts by oxidizing the substrate by FAD to generate the corresponding imine that is subsequently hydrolyzed. Acts as a corepressor by mediating demethylation of H3K4me, a specific tag for epigenetic transcriptional activation. Demethylates both mono- (H3K4me1) and di-methylated (H3K4me2) H3K4me; Belongs to the flavin monoamine oxidase family. (834 aa)
ercc6Excision repair cross-complementation group 6. (1439 aa)
cdca7Cell division cycle associated 7a. (450 aa)
ikbipUncharacterized protein. (408 aa)
map3k20Uncharacterized protein. (804 aa)
men1Multiple endocrine neoplasia I. (628 aa)
itgb6Integrin beta; Belongs to the integrin beta chain family. (689 aa)
Itgb6PSI domain-containing protein. (114 aa)
ercc8Excision repair cross-complementation group 8. (409 aa)
fbxo4F-box protein 4. (396 aa)
tankTRAF family member-associated NFKB activator. (335 aa)
LOC105941156Uncharacterized protein. (336 aa)
cdca7lCell division cycle associated 7b. (410 aa)
LOC101485000Deoxyribonuclease 1 like 4, tandem duplicate 2. (328 aa)
xrcc5X-ray repair cross-complementing protein 5; Single-stranded DNA-dependent ATP-dependent helicase. Belongs to the ku80 family. (723 aa)
LOC101486342Uncharacterized protein. (191 aa)
ENSMZEP00005012187X-ray repair cross-complementing protein 5; Single-stranded DNA-dependent ATP-dependent helicase. Belongs to the ku80 family. (691 aa)
babam2BRISC and BRCA1 A complex member 2. (391 aa)
ercc1Excision repair cross-complementation group 1. (352 aa)
LOC101476906BRCA1 associated RING domain 1. (713 aa)
GADD45AGrowth arrest and DNA-damage-inducible, alpha, b. (183 aa)
fancd2FA complementation group D2. (1425 aa)
ENSMZEP00005014399Uncharacterized protein. (165 aa)
dcun1d3DCN1-like protein. (326 aa)
sfrp2Secreted frizzled-related protein 2. (295 aa)
sirt1Deacetylase sirtuin-type domain-containing protein. (715 aa)
brca2BRCA2 DNA repair associated. (3307 aa)
ENSMZEP00005015265Ints3 and nabp interacting protein. (89 aa)
ect2Epithelial cell transforming 2. (939 aa)
ticrrTreslin_N domain-containing protein. (1869 aa)
LOC101481251X-ray repair complementing defective repair in Chinese hamster cells 4. (335 aa)
brat1BRCA1-associated ATM activator 1. (912 aa)
ints3Integrator complex subunit 3. (1019 aa)
ENSMZEP00005016530TAN domain-containing protein. (177 aa)
AtmUncharacterized protein. (139 aa)
rad51DNA repair protein RAD51 homolog; Plays an important role in homologous strand exchange, a key step in DNA repair through homologous recombination. Binds to single and double-stranded DNA and exhibits DNA-dependent ATPase activity. Catalyzes the recognition of homology and strand exchange between homologous DNA partners to form a joint molecule between a processed DNA break and the repair template. Binds to single-stranded DNA in an ATP-dependent manner to form nucleoprotein filaments which are essential for the homology search and strand exchange. Belongs to the RecA family. RAD51 sub [...] (336 aa)
ENSMZEP00005017141Reverse transcriptase domain-containing protein. (781 aa)
ino80INO80 complex ATPase subunit. (1506 aa)
ENSMZEP00005018137Reverse transcriptase domain-containing protein. (758 aa)
Brcc3BRCA1/BRCA2-containing complex, subunit 3. (278 aa)
kars1Lysine--tRNA ligase. (605 aa)
xrcc4Uncharacterized protein. (294 aa)
cop1COP1 E3 ubiquitin ligase. (715 aa)
ENSMZEP00005020665Reverse transcriptase domain-containing protein. (792 aa)
rfwd3Ring finger and WD repeat domain 3. (707 aa)
tp53bp1Tumor protein p53 binding protein, 1. (1709 aa)
LOC101477392Nucleic acid binding protein 1a. (220 aa)
LOC101476025Deoxyribonuclease; Belongs to the DNase I family. (280 aa)
INIPINTS3 and NABP interacting protein. (73 aa)
LOC101484052Zgc:153993. (274 aa)
swi5SWI5 homologous recombination repair protein. (135 aa)
LOC112430600Reverse transcriptase domain-containing protein. (1080 aa)
topbp1DNA topoisomerase II binding protein 1. (1514 aa)
LOC101483818Crystallin, alpha B, a; Belongs to the small heat shock protein (HSP20) family. (164 aa)
ptprcProtein tyrosine phosphatase receptor type C. (1195 aa)
babam1BRISC and BRCA1 A complex member 1. (378 aa)
smpd1Sphingomyelin phosphodiesterase; Converts sphingomyelin to ceramide. (602 aa)
rad1RAD1 homolog (S. pombe). (279 aa)
LOC101477921BH4_2 domain-containing protein. (198 aa)
XRCC2X-ray repair cross complementing 2. (301 aa)
chek2Checkpoint kinase 2. (490 aa)
brca1Uncharacterized protein. (1389 aa)
blmBLM RecQ like helicase. (1381 aa)
LOC101485820Uncharacterized protein. (446 aa)
baxUncharacterized protein. (205 aa)
ENSMZEP00005031749Uncharacterized protein. (263 aa)
LOC101482089ETS transcription factor ELK1. (582 aa)
LOC101473892Transforming growth factor beta; Belongs to the TGF-beta family. (383 aa)
uimc1RAP80_UIM domain-containing protein. (957 aa)
spidrUncharacterized protein. (935 aa)
bcl2BCL2 apoptosis regulator b. (228 aa)
stk11Serine/threonine kinase 11; Belongs to the protein kinase superfamily. (424 aa)
LOC101481520DNA (cytosine-5-)-methyltransferase 3 beta, duplicate a; Belongs to the class I-like SAM-binding methyltransferase superfamily. C5-methyltransferase family. (1465 aa)
abcg5ATP-binding cassette, sub-family G (WHITE), member 5. (656 aa)
xrcc6X-ray repair complementing defective repair in Chinese hamster cells 6. (610 aa)
eya3Eyes absent homolog; Belongs to the HAD-like hydrolase superfamily. EYA family. (607 aa)
Your Current Organism:
Maylandia zebra
NCBI taxonomy Id: 106582
Other names: M. zebra, Metriaclima zebra, Pseudotropheus zebra, zebra mbuna
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