32 items (Maylandia zebra) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	cspg4	Chondroitin sulfate proteoglycan 4. (2281 aa)
	ENSMZEP00005037642	Uncharacterized protein. (595 aa)
	ENSMZEP00005037640	Uncharacterized protein. (535 aa)
	ENSMZEP00005037637	Uncharacterized protein. (564 aa)
	ENSMZEP00005037636	Uncharacterized protein. (546 aa)
	cdon	Cell adhesion associated, oncogene regulated. (1122 aa)
	LOC101487269	Nerve growth factor receptor a (TNFR superfamily, member 16). (285 aa)
	LOC101467603	Low density lipoprotein receptor-related protein 5. (1647 aa)
	ramp2	Receptor (G protein-coupled) activity modifying protein 2. (239 aa)
	boc	BOC cell adhesion associated, oncogene regulated. (1048 aa)
	rgma	Repulsive guidance molecule BMP co-receptor a. (446 aa)
	ENSMZEP00005027844	Uncharacterized protein. (549 aa)
	ENSMZEP00005027814	Uncharacterized protein. (593 aa)
	ENSMZEP00005000199	Uncharacterized protein. (574 aa)
	LOC101467429	Receptor activity modifying protein 1. (149 aa)
	LOC101467714	Atypical chemokine receptor 3a; Belongs to the G-protein coupled receptor 1 family. (380 aa)
	LOC101470339	Atypical chemokine receptor 3; Belongs to the G-protein coupled receptor 1 family. (463 aa)
	LOC101486019	RGM domain family, member D. (463 aa)
	LOC101472092	Uncharacterized protein. (201 aa)
	RAMP3	Receptor activity modifying protein 3. (165 aa)
	LOC101486092	Si:dkey-193c22.2. (2401 aa)
	LOC101467412	Uncharacterized protein. (149 aa)
	ENSMZEP00005019519	Uncharacterized protein. (120 aa)
	LOC101487557	Nerve growth factor receptor b. (427 aa)
	reck	Reversion-inducing-cysteine-rich protein with kazal motifs. (954 aa)
	LOC101476648	Uncharacterized protein. (2335 aa)
	rgmb	Repulsive guidance molecule BMP co-receptor b. (474 aa)
	LOC101479411	Hemojuvelin BMP co-receptor. (418 aa)
	LOC101464216	Uncharacterized protein. (465 aa)
	LOC101476287	Low-density lipoprotein receptor-related protein; Component of the Wnt-Fzd-LRP5-LRP6 complex that triggers beta-catenin signaling through inducing aggregation of receptor-ligand complexes into ribosome-sized signalsomes. Belongs to the LDLR family. (1616 aa)
	ENSMZEP00005027785	Uncharacterized protein. (557 aa)
	ENSMZEP00005027800	Uncharacterized protein. (590 aa)

Your Current Organism:

Maylandia zebra

NCBI taxonomy Id: 106582
Other names: M. zebra, Metriaclima zebra, Pseudotropheus zebra, zebra mbuna

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structured XML interaction data, according to the 'PSI-MI' data standard

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node degree of proteins in your network (given the current score cut-off)

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a flat-file format describing the coordinates and colors of nodes in the network

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSMZEP00005019519	LOC101472092	ENSMZEP00005019519	ENSMZEP00005012250	Uncharacterized protein.	Uncharacterized protein.	0.512
ENSMZEP00005019519	RAMP3	ENSMZEP00005019519	ENSMZEP00005015660	Uncharacterized protein.	Receptor activity modifying protein 3.	0.516
ENSMZEP00005019519	ramp2	ENSMZEP00005019519	ENSMZEP00005030393	Uncharacterized protein.	Receptor (G protein-coupled) activity modifying protein 2.	0.512
LOC101467412	LOC101467429	ENSMZEP00005019495	ENSMZEP00005001007	Uncharacterized protein.	Receptor activity modifying protein 1.	0.902
LOC101467412	LOC101472092	ENSMZEP00005019495	ENSMZEP00005012250	Uncharacterized protein.	Uncharacterized protein.	0.949
LOC101467412	RAMP3	ENSMZEP00005019495	ENSMZEP00005015660	Uncharacterized protein.	Receptor activity modifying protein 3.	0.953
LOC101467412	ramp2	ENSMZEP00005019495	ENSMZEP00005030393	Uncharacterized protein.	Receptor (G protein-coupled) activity modifying protein 2.	0.953
LOC101467429	LOC101467412	ENSMZEP00005001007	ENSMZEP00005019495	Receptor activity modifying protein 1.	Uncharacterized protein.	0.902
LOC101467429	LOC101472092	ENSMZEP00005001007	ENSMZEP00005012250	Receptor activity modifying protein 1.	Uncharacterized protein.	0.949
LOC101467429	RAMP3	ENSMZEP00005001007	ENSMZEP00005015660	Receptor activity modifying protein 1.	Receptor activity modifying protein 3.	0.953
LOC101467429	ramp2	ENSMZEP00005001007	ENSMZEP00005030393	Receptor activity modifying protein 1.	Receptor (G protein-coupled) activity modifying protein 2.	0.953
LOC101467603	LOC101476287	ENSMZEP00005030562	ENSMZEP00005025454	Low density lipoprotein receptor-related protein 5.	Low-density lipoprotein receptor-related protein; Component of the Wnt-Fzd-LRP5-LRP6 complex that triggers beta-catenin signaling through inducing aggregation of receptor-ligand complexes into ribosome-sized signalsomes. Belongs to the LDLR family.	0.901
LOC101467714	LOC101470339	ENSMZEP00005002706	ENSMZEP00005005423	Atypical chemokine receptor 3a; Belongs to the G-protein coupled receptor 1 family.	Atypical chemokine receptor 3; Belongs to the G-protein coupled receptor 1 family.	0.901
LOC101470339	LOC101467714	ENSMZEP00005005423	ENSMZEP00005002706	Atypical chemokine receptor 3; Belongs to the G-protein coupled receptor 1 family.	Atypical chemokine receptor 3a; Belongs to the G-protein coupled receptor 1 family.	0.901
LOC101472092	ENSMZEP00005019519	ENSMZEP00005012250	ENSMZEP00005019519	Uncharacterized protein.	Uncharacterized protein.	0.512
LOC101472092	LOC101467412	ENSMZEP00005012250	ENSMZEP00005019495	Uncharacterized protein.	Uncharacterized protein.	0.949
LOC101472092	LOC101467429	ENSMZEP00005012250	ENSMZEP00005001007	Uncharacterized protein.	Receptor activity modifying protein 1.	0.949
LOC101472092	RAMP3	ENSMZEP00005012250	ENSMZEP00005015660	Uncharacterized protein.	Receptor activity modifying protein 3.	0.966
LOC101472092	ramp2	ENSMZEP00005012250	ENSMZEP00005030393	Uncharacterized protein.	Receptor (G protein-coupled) activity modifying protein 2.	0.900
LOC101476287	LOC101467603	ENSMZEP00005025454	ENSMZEP00005030562	Low-density lipoprotein receptor-related protein; Component of the Wnt-Fzd-LRP5-LRP6 complex that triggers beta-catenin signaling through inducing aggregation of receptor-ligand complexes into ribosome-sized signalsomes. Belongs to the LDLR family.	Low density lipoprotein receptor-related protein 5.	0.901