39 items (Maylandia zebra) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	rpl37	Ribosomal protein L37; Binds to the 23S rRNA. (97 aa)
	LOC101488024	Ribosomal protein L3; Belongs to the universal ribosomal protein uL3 family. (404 aa)
	ENSMZEP00005037597	Ribosomal_L16 domain-containing protein. (145 aa)
	LOC101463883	Ribosomal protein, large P2, like; Belongs to the eukaryotic ribosomal protein P1/P2 family. (114 aa)
	rplp1	Ribosomal protein, large, P1; Belongs to the eukaryotic ribosomal protein P1/P2 family. (114 aa)
	LOC101464765	Ribosomal protein L10. (215 aa)
	rpl35	Ribosomal protein L35. (123 aa)
	uba52	Ubiquitin A-52 residue ribosomal protein fusion product 1. (128 aa)
	LOC101473049	Ribosomal protein L3 like; Belongs to the universal ribosomal protein uL3 family. (429 aa)
	rpl17	Ribosomal protein L17; Belongs to the universal ribosomal protein uL22 family. (187 aa)
	RPL19-2	Ribosomal protein L19; Belongs to the eukaryotic ribosomal protein eL19 family. (194 aa)
	rpl4	Ribosomal protein L4. (369 aa)
	rpl21	Ribosomal protein L21. (160 aa)
	rpl7	Ribosomal protein L7. (245 aa)
	mrpl1	Mitochondrial ribosomal protein L1. (319 aa)
	rpl23a	Ribosomal protein L23a; Belongs to the universal ribosomal protein uL23 family. (170 aa)
	RPL3L	Ribosomal protein L3 like; Belongs to the universal ribosomal protein uL3 family. (401 aa)
	rpl28	Ribosomal protein L28. (140 aa)
	rpl12	Ribosomal protein L12; Belongs to the universal ribosomal protein uL11 family. (165 aa)
	ENSMZEP00005004035	Uncharacterized protein. (134 aa)
	LOC101466703	Ribosomal protein, large P2; Belongs to the eukaryotic ribosomal protein P1/P2 family. (114 aa)
	RPL7A	Ribosomal protein L7a. (281 aa)
	rpl30	Ribosomal protein L30. (116 aa)
	ENSMZEP00005004836	Uncharacterized protein. (106 aa)
	RPL5	Ribosomal protein L5. (298 aa)
	ENSMZEP00005006598	Ribosomal protein L38; Belongs to the eukaryotic ribosomal protein eL38 family. (70 aa)
	zcchc17	Zinc finger, CCHC domain containing 17. (248 aa)
	ENSMZEP00005009682	Ribosomal_L18e/L15P domain-containing protein. (192 aa)
	LOC101484456	Ribosomal protein L26. (145 aa)
	rpl6	Ribosomal protein L6. (295 aa)
	RPL5-2	Ribosomal protein L5b. (297 aa)
	LOC112433820	Ribosomal protein L14. (148 aa)
	rpl37a	Ribosomal protein L37a. (90 aa)
	LOC101482523	Ribosomal_L14e domain-containing protein. (137 aa)
	RPL27A	Ribosomal protein L27a; Belongs to the universal ribosomal protein uL15 family. (195 aa)
	rpl29	60S ribosomal protein L29; Belongs to the eukaryotic ribosomal protein eL29 family. (64 aa)
	rpl7l1	Ribosomal protein L7-like 1. (283 aa)
	RPL19	Ribosomal protein L19; Belongs to the eukaryotic ribosomal protein eL19 family. (197 aa)
	rpl18	Ribosomal protein L18. (188 aa)

Your Current Organism:

Maylandia zebra

NCBI taxonomy Id: 106582
Other names: M. zebra, Metriaclima zebra, Pseudotropheus zebra, zebra mbuna

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structured XML interaction data, according to the 'PSI-MI' data standard

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node degree of proteins in your network (given the current score cut-off)

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a flat-file format describing the coordinates and colors of nodes in the network

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSMZEP00005004035	ENSMZEP00005004836	ENSMZEP00005004035	ENSMZEP00005004836	Uncharacterized protein.	Uncharacterized protein.	0.948
ENSMZEP00005004035	ENSMZEP00005006598	ENSMZEP00005004035	ENSMZEP00005006598	Uncharacterized protein.	Ribosomal protein L38; Belongs to the eukaryotic ribosomal protein eL38 family.	0.989
ENSMZEP00005004035	ENSMZEP00005009682	ENSMZEP00005004035	ENSMZEP00005009682	Uncharacterized protein.	Ribosomal_L18e/L15P domain-containing protein.	0.969
ENSMZEP00005004035	ENSMZEP00005037597	ENSMZEP00005004035	ENSMZEP00005037597	Uncharacterized protein.	Ribosomal_L16 domain-containing protein.	0.969
ENSMZEP00005004035	LOC101463883	ENSMZEP00005004035	ENSMZEP00005037532	Uncharacterized protein.	Ribosomal protein, large P2, like; Belongs to the eukaryotic ribosomal protein P1/P2 family.	0.969
ENSMZEP00005004035	LOC101464765	ENSMZEP00005004035	ENSMZEP00005035513	Uncharacterized protein.	Ribosomal protein L10.	0.969
ENSMZEP00005004035	LOC101466703	ENSMZEP00005004035	ENSMZEP00005004149	Uncharacterized protein.	Ribosomal protein, large P2; Belongs to the eukaryotic ribosomal protein P1/P2 family.	0.969
ENSMZEP00005004035	LOC101473049	ENSMZEP00005004035	ENSMZEP00005034281	Uncharacterized protein.	Ribosomal protein L3 like; Belongs to the universal ribosomal protein uL3 family.	0.950
ENSMZEP00005004035	LOC101482523	ENSMZEP00005004035	ENSMZEP00005015675	Uncharacterized protein.	Ribosomal_L14e domain-containing protein.	0.948
ENSMZEP00005004035	LOC101484456	ENSMZEP00005004035	ENSMZEP00005011860	Uncharacterized protein.	Ribosomal protein L26.	0.993
ENSMZEP00005004035	LOC101488024	ENSMZEP00005004035	ENSMZEP00005001900	Uncharacterized protein.	Ribosomal protein L3; Belongs to the universal ribosomal protein uL3 family.	0.950
ENSMZEP00005004035	LOC112433820	ENSMZEP00005004035	ENSMZEP00005014015	Uncharacterized protein.	Ribosomal protein L14.	0.948
ENSMZEP00005004035	RPL19	ENSMZEP00005004035	ENSMZEP00005020929	Uncharacterized protein.	Ribosomal protein L19; Belongs to the eukaryotic ribosomal protein eL19 family.	0.977
ENSMZEP00005004035	RPL19-2	ENSMZEP00005004035	ENSMZEP00005030757	Uncharacterized protein.	Ribosomal protein L19; Belongs to the eukaryotic ribosomal protein eL19 family.	0.977
ENSMZEP00005004035	RPL27A	ENSMZEP00005004035	ENSMZEP00005016709	Uncharacterized protein.	Ribosomal protein L27a; Belongs to the universal ribosomal protein uL15 family.	0.992
ENSMZEP00005004035	RPL3L	ENSMZEP00005004035	ENSMZEP00005003325	Uncharacterized protein.	Ribosomal protein L3 like; Belongs to the universal ribosomal protein uL3 family.	0.950
ENSMZEP00005004035	RPL5	ENSMZEP00005004035	ENSMZEP00005005877	Uncharacterized protein.	Ribosomal protein L5.	0.978
ENSMZEP00005004035	RPL5-2	ENSMZEP00005004035	ENSMZEP00005013308	Uncharacterized protein.	Ribosomal protein L5b.	0.978
ENSMZEP00005004035	RPL7A	ENSMZEP00005004035	ENSMZEP00005004169	Uncharacterized protein.	Ribosomal protein L7a.	0.992
ENSMZEP00005004035	mrpl1	ENSMZEP00005004035	ENSMZEP00005027196	Uncharacterized protein.	Mitochondrial ribosomal protein L1.	0.948