STRINGSTRING
ift52 ift52 LOC105941156 LOC105941156 ALX3 ALX3 LOC101487542 LOC101487542 fras1 fras1 ENSMZEP00005026775 ENSMZEP00005026775 fbxw4 fbxw4 lef1 lef1 bax bax sall4 sall4 wdr19 wdr19 LOC101469119 LOC101469119 CDH2 CDH2 ENSMZEP00005034628 ENSMZEP00005034628 msx1 msx1 LOC101470732 LOC101470732 wdpcp wdpcp nipbl nipbl LOC101466985 LOC101466985 ift140 ift140 hand2 hand2 LOC101474152 LOC101474152 tbx3 tbx3 LOC101478247 LOC101478247 LOC101481185 LOC101481185 LOC101473404 LOC101473404 LOC101485383 LOC101485383 LOC101472197 LOC101472197 fgf4 fgf4 LOC101467180 LOC101467180 tbx5 tbx5 med1 med1 ENSMZEP00005018586 ENSMZEP00005018586 LOC101468530 LOC101468530 map3k20 map3k20 sp9 sp9 LOC101485614 LOC101485614 LOC101484873 LOC101484873 ENSMZEP00005004331 ENSMZEP00005004331 ENSMZEP00005003655 ENSMZEP00005003655 LOC101472093 LOC101472093 LOC112432380 LOC112432380 LOC101474919 LOC101474919 tbx4 tbx4 LOC101479746 LOC101479746 sfrp2 sfrp2 ENSMZEP00005014399 ENSMZEP00005014399 fbln1 fbln1 mks1 mks1 frem3 frem3 crbn crbn med12 med12 tll1 tll1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
ift52Intraflagellar transport 52 homolog (Chlamydomonas). (439 aa)
LOC105941156Uncharacterized protein. (336 aa)
ALX3ALX homeobox 3. (367 aa)
LOC101487542Growth arrest-specific 1b. (246 aa)
fras1Fraser extracellular matrix complex subunit 1. (4003 aa)
ENSMZEP00005026775Uncharacterized protein. (203 aa)
fbxw4F-box and WD repeat domain containing 4. (389 aa)
lef1Lymphoid enhancer-binding factor 1. (361 aa)
baxUncharacterized protein. (205 aa)
sall4Spalt-like transcription factor 4. (1081 aa)
wdr19WD repeat domain 19. (1339 aa)
LOC101469119Uncharacterized protein; Cadherins are calcium-dependent cell adhesion proteins. (880 aa)
CDH2Cadherin 2; Cadherins are calcium-dependent cell adhesion proteins. (906 aa)
ENSMZEP00005034628Uncharacterized protein. (192 aa)
msx1Muscle segment homeobox 1a. (283 aa)
LOC101470732Homeobox C10a. (330 aa)
wdpcpWD repeat containing planar cell polarity effector. (698 aa)
nipblNipped-B protein. (2305 aa)
LOC101466985Dickkopf WNT signaling pathway inhibitor 1a. (253 aa)
ift140Intraflagellar transport 140 homolog (Chlamydomonas). (1362 aa)
hand2Heart and neural crest derivatives expressed 2. (245 aa)
LOC101474152T-box transcription factor 5a. (525 aa)
tbx3T-box transcription factor 3a. (710 aa)
LOC101478247Nipped-B protein. (2564 aa)
LOC101481185Mothers against decapentaplegic homolog. (503 aa)
LOC101473404Homeobox protein engrailed-like. (291 aa)
LOC101485383Mothers against decapentaplegic homolog. (606 aa)
LOC101472197Fibroblast growth factor; Belongs to the heparin-binding growth factors family. (190 aa)
fgf4Fibroblast growth factor; Belongs to the heparin-binding growth factors family. (193 aa)
LOC101467180Mothers against decapentaplegic homolog. (494 aa)
tbx5Uncharacterized protein. (529 aa)
med1Mediator of RNA polymerase II transcription subunit 1; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors. (1752 aa)
ENSMZEP00005018586Fin bud initiation factor b. (193 aa)
LOC101468530Sp8 transcription factor b. (452 aa)
map3k20Uncharacterized protein. (804 aa)
sp9Sp9 transcription factor. (439 aa)
LOC101485614Mothers against decapentaplegic homolog. (510 aa)
LOC101484873Homeobox protein engrailed-like. (284 aa)
ENSMZEP00005004331T-box transcription factor 3b. (380 aa)
ENSMZEP00005003655RPGRIP1 like. (1060 aa)
LOC101472093Protein kinase domain-containing protein. (668 aa)
LOC112432380Uncharacterized protein. (204 aa)
LOC101474919Bone morphogenetic protein 1a. (967 aa)
tbx4T-box transcription factor 4. (534 aa)
LOC101479746FRAS1 related extracellular matrix 2b. (3102 aa)
sfrp2Secreted frizzled-related protein 2. (295 aa)
ENSMZEP00005014399Uncharacterized protein. (165 aa)
fbln1Fibulin-1; Incorporated into fibronectin-containing matrix fibers. May play a role in cell adhesion and migration along protein fibers within the extracellular matrix (ECM). Could be important for certain developmental processes and contribute to the supramolecular organization of ECM architecture, in particular to those of basement membranes. (685 aa)
mks1MKS transition zone complex subunit 1. (563 aa)
frem3Fras1 related extracellular matrix 3. (3135 aa)
crbnCereblon. (448 aa)
med12Mediator complex subunit 12. (2076 aa)
tll1Metalloendopeptidase. (1028 aa)
Your Current Organism:
Maylandia zebra
NCBI taxonomy Id: 106582
Other names: M. zebra, Metriaclima zebra, Pseudotropheus zebra, zebra mbuna
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