12 items (Maylandia zebra) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	LOC101474152	T-box transcription factor 5a. (525 aa)
	tbx3	T-box transcription factor 3a. (710 aa)
	LOC101481185	Mothers against decapentaplegic homolog. (503 aa)
	LOC101485383	Mothers against decapentaplegic homolog. (606 aa)
	LOC101467180	Mothers against decapentaplegic homolog. (494 aa)
	foxn4	Forkhead box N4. (506 aa)
	LOC101483795	T-box transcription factor 2a. (645 aa)
	LOC101485614	Mothers against decapentaplegic homolog. (510 aa)
	ENSMZEP00005004331	T-box transcription factor 3b. (380 aa)
	TBX2	T-box transcription factor 2. (684 aa)
	med10	Mediator of RNA polymerase II transcription subunit 10; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors. (134 aa)
	pou6f1	POU domain protein. (627 aa)

Your Current Organism:

Maylandia zebra

NCBI taxonomy Id: 106582
Other names: M. zebra, Metriaclima zebra, Pseudotropheus zebra, zebra mbuna

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
LOC101481185	LOC101485383	ENSMZEP00005024930	ENSMZEP00005023404	Mothers against decapentaplegic homolog.	Mothers against decapentaplegic homolog.	0.901
LOC101481185	LOC101485614	ENSMZEP00005024930	ENSMZEP00005006313	Mothers against decapentaplegic homolog.	Mothers against decapentaplegic homolog.	0.900
LOC101485383	LOC101481185	ENSMZEP00005023404	ENSMZEP00005024930	Mothers against decapentaplegic homolog.	Mothers against decapentaplegic homolog.	0.901
LOC101485383	LOC101485614	ENSMZEP00005023404	ENSMZEP00005006313	Mothers against decapentaplegic homolog.	Mothers against decapentaplegic homolog.	0.901
LOC101485614	LOC101481185	ENSMZEP00005006313	ENSMZEP00005024930	Mothers against decapentaplegic homolog.	Mothers against decapentaplegic homolog.	0.900
LOC101485614	LOC101485383	ENSMZEP00005006313	ENSMZEP00005023404	Mothers against decapentaplegic homolog.	Mothers against decapentaplegic homolog.	0.901