9 items (Maylandia zebra) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	PRADC1	Protease associated domain containing 1. (191 aa)
	nkx2-5	NK2 homeobox 5. (320 aa)
	ENSMZEP00005004331	T-box transcription factor 3b. (380 aa)
	scube2	Signal peptide, CUB domain, EGF-like 2. (1020 aa)
	LOC112429674	Dispatched homolog 1 (Drosophila). (1571 aa)
	LOC101485133	SSD domain-containing protein. (1337 aa)
	tbx3	T-box transcription factor 3a. (710 aa)
	LOC101465517	Von Willebrand factor A domain containing 5B2. (1028 aa)
	shh	Hedgehog protein; Intercellular signal essential for a variety of patterning events during development. (415 aa)

Your Current Organism:

Maylandia zebra

NCBI taxonomy Id: 106582
Other names: M. zebra, Metriaclima zebra, Pseudotropheus zebra, zebra mbuna

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structured XML interaction data, according to the 'PSI-MI' data standard

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a flat-file format describing the coordinates and colors of nodes in the network

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSMZEP00005004331	nkx2-5	ENSMZEP00005004331	ENSMZEP00005011918	T-box transcription factor 3b.	NK2 homeobox 5.	0.487
LOC101485133	shh	ENSMZEP00005032636	ENSMZEP00005029643	SSD domain-containing protein.	Hedgehog protein; Intercellular signal essential for a variety of patterning events during development.	0.863
LOC112429674	shh	ENSMZEP00005030564	ENSMZEP00005029643	Dispatched homolog 1 (Drosophila).	Hedgehog protein; Intercellular signal essential for a variety of patterning events during development.	0.863
nkx2-5	ENSMZEP00005004331	ENSMZEP00005011918	ENSMZEP00005004331	NK2 homeobox 5.	T-box transcription factor 3b.	0.487
nkx2-5	tbx3	ENSMZEP00005011918	ENSMZEP00005025213	NK2 homeobox 5.	T-box transcription factor 3a.	0.487
scube2	shh	ENSMZEP00005020195	ENSMZEP00005029643	Signal peptide, CUB domain, EGF-like 2.	Hedgehog protein; Intercellular signal essential for a variety of patterning events during development.	0.564
shh	LOC101485133	ENSMZEP00005029643	ENSMZEP00005032636	Hedgehog protein; Intercellular signal essential for a variety of patterning events during development.	SSD domain-containing protein.	0.863
shh	LOC112429674	ENSMZEP00005029643	ENSMZEP00005030564	Hedgehog protein; Intercellular signal essential for a variety of patterning events during development.	Dispatched homolog 1 (Drosophila).	0.863
shh	scube2	ENSMZEP00005029643	ENSMZEP00005020195	Hedgehog protein; Intercellular signal essential for a variety of patterning events during development.	Signal peptide, CUB domain, EGF-like 2.	0.564
tbx3	nkx2-5	ENSMZEP00005025213	ENSMZEP00005011918	T-box transcription factor 3a.	NK2 homeobox 5.	0.487