16 items (Maylandia zebra) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	ENSMZEP00005031047	Uncharacterized protein. (82 aa)
	ENSMZEP00005013595	Uncharacterized protein. (273 aa)
	ash2l	Ash2 like, histone lysine methyltransferase complex subunit. (590 aa)
	LOC101484997	Uncharacterized protein. (393 aa)
	ENSMZEP00005012996	Uncharacterized protein. (115 aa)
	LOC101468274	WD_REPEATS_REGION domain-containing protein. (315 aa)
	dpy30	Dpy-30 histone methyltransferase complex regulatory subunit. (104 aa)
	wdr5	WD repeat domain 5. (333 aa)
	rbbp5	Retinoblastoma binding protein 5. (510 aa)
	LOC101478368	CXXC finger protein 1a. (507 aa)
	ENSMZEP00005035836	Uncharacterized protein. (294 aa)
	setd1b	SET domain containing 1B, histone lysine methyltransferase a. (1809 aa)
	hcfc2	Host cell factor C2. (761 aa)
	setd1a	SET domain containing 1A, histone lysine methyltransferase. (2195 aa)
	LOC101463718	CXXC finger protein 1b. (538 aa)
	wdr82	WD repeat domain 82. (313 aa)

Your Current Organism:

Maylandia zebra

NCBI taxonomy Id: 106582
Other names: M. zebra, Metriaclima zebra, Pseudotropheus zebra, zebra mbuna

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structured XML interaction data, according to the 'PSI-MI' data standard

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node degree of proteins in your network (given the current score cut-off)

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a flat-file format describing the coordinates and colors of nodes in the network

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSMZEP00005012996	ENSMZEP00005013595	ENSMZEP00005012996	ENSMZEP00005013595	Uncharacterized protein.	Uncharacterized protein.	0.525
ENSMZEP00005012996	ENSMZEP00005035836	ENSMZEP00005012996	ENSMZEP00005035836	Uncharacterized protein.	Uncharacterized protein.	0.525
ENSMZEP00005012996	LOC101463718	ENSMZEP00005012996	ENSMZEP00005013813	Uncharacterized protein.	CXXC finger protein 1b.	0.780
ENSMZEP00005012996	LOC101468274	ENSMZEP00005012996	ENSMZEP00005015918	Uncharacterized protein.	WD_REPEATS_REGION domain-containing protein.	0.759
ENSMZEP00005012996	LOC101478368	ENSMZEP00005012996	ENSMZEP00005035846	Uncharacterized protein.	CXXC finger protein 1a.	0.780
ENSMZEP00005012996	ash2l	ENSMZEP00005012996	ENSMZEP00005012966	Uncharacterized protein.	Ash2 like, histone lysine methyltransferase complex subunit.	0.944
ENSMZEP00005012996	dpy30	ENSMZEP00005012996	ENSMZEP00005020379	Uncharacterized protein.	Dpy-30 histone methyltransferase complex regulatory subunit.	0.892
ENSMZEP00005012996	hcfc2	ENSMZEP00005012996	ENSMZEP00005034534	Uncharacterized protein.	Host cell factor C2.	0.525
ENSMZEP00005012996	rbbp5	ENSMZEP00005012996	ENSMZEP00005022762	Uncharacterized protein.	Retinoblastoma binding protein 5.	0.944
ENSMZEP00005012996	wdr5	ENSMZEP00005012996	ENSMZEP00005021199	Uncharacterized protein.	WD repeat domain 5.	0.807
ENSMZEP00005012996	wdr82	ENSMZEP00005012996	ENSMZEP00005019570	Uncharacterized protein.	WD repeat domain 82.	0.759
ENSMZEP00005013595	ENSMZEP00005012996	ENSMZEP00005013595	ENSMZEP00005012996	Uncharacterized protein.	Uncharacterized protein.	0.525
ENSMZEP00005013595	ENSMZEP00005031047	ENSMZEP00005013595	ENSMZEP00005031047	Uncharacterized protein.	Uncharacterized protein.	0.525
ENSMZEP00005013595	ENSMZEP00005035836	ENSMZEP00005013595	ENSMZEP00005035836	Uncharacterized protein.	Uncharacterized protein.	0.901
ENSMZEP00005013595	LOC101463718	ENSMZEP00005013595	ENSMZEP00005013813	Uncharacterized protein.	CXXC finger protein 1b.	0.600
ENSMZEP00005013595	LOC101468274	ENSMZEP00005013595	ENSMZEP00005015918	Uncharacterized protein.	WD_REPEATS_REGION domain-containing protein.	0.610
ENSMZEP00005013595	LOC101478368	ENSMZEP00005013595	ENSMZEP00005035846	Uncharacterized protein.	CXXC finger protein 1a.	0.600
ENSMZEP00005013595	ash2l	ENSMZEP00005013595	ENSMZEP00005012966	Uncharacterized protein.	Ash2 like, histone lysine methyltransferase complex subunit.	0.879
ENSMZEP00005013595	dpy30	ENSMZEP00005013595	ENSMZEP00005020379	Uncharacterized protein.	Dpy-30 histone methyltransferase complex regulatory subunit.	0.684
ENSMZEP00005013595	hcfc2	ENSMZEP00005013595	ENSMZEP00005034534	Uncharacterized protein.	Host cell factor C2.	0.901