(62 nodes) Vesicle docking network (Maylandia zebra)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	ENSMZEP00005000087	Battenin. (374 aa)
	plek	Pleckstrin. (351 aa)
	cep83	Centrosomal protein 83. (720 aa)
	LOC101482480	Unc-13 homolog A. (1562 aa)
	LOC101472715	Si:ch211-208k15.1; Belongs to the syntaxin family. (285 aa)
	ENSMZEP00005033264	Uncharacterized protein. (314 aa)
	LOC101474139	RAB8A, member RAS oncogene family. (206 aa)
	rab12	RAB12, member RAS oncogene family. (243 aa)
	stx8	t-SNARE coiled-coil homology domain-containing protein. (238 aa)
	LOC101467244	Uncharacterized protein. (221 aa)
	vps11	Vacuolar protein sorting-associated protein 11 homolog; Plays a role in vesicle-mediated protein trafficking to lysosomal compartments including the endocytic membrane transport and autophagic pathways. Believed to act as a core component of the putative HOPS and CORVET endosomal tethering complexes. Belongs to the VPS11 family. (937 aa)
	stx16	Syntaxin 16; Belongs to the syntaxin family. (302 aa)
	LOC101478685	Multiple EGF-like-domains 8. (207 aa)
	ENSMZEP00005028002	t-SNARE coiled-coil homology domain-containing protein; Belongs to the syntaxin family. (245 aa)
	LOC101472458	Syntaxin 6; Belongs to the syntaxin family. (260 aa)
	ENSMZEP00005027515	Uncharacterized protein. (1513 aa)
	scfd2	Sec1 family domain containing 2; Belongs to the STXBP/unc-18/SEC1 family. (691 aa)
	uso1	USO1 vesicle transport factor. (977 aa)
	rabepk	Rab9 effector protein with kelch motifs. (350 aa)
	stxbp3	Syntaxin binding protein 3; Belongs to the STXBP/unc-18/SEC1 family. (592 aa)
	STX11-2	t-SNARE coiled-coil homology domain-containing protein. (281 aa)
	LOC101470530	Syntaxin binding protein 1b; Belongs to the STXBP/unc-18/SEC1 family. (603 aa)
	stx12	Syntaxin 12; Belongs to the syntaxin family. (267 aa)
	STX11	Syntaxin 11. (302 aa)
	ENSMZEP00005023613	t-SNARE coiled-coil homology domain-containing protein. (103 aa)
	exoc2	Exocyst complex component 2; Component of the exocyst complex involved in the docking of exocytic vesicles with fusion sites on the plasma membrane. Belongs to the SEC5 family. (919 aa)
	LOC101469587	t-SNARE coiled-coil homology domain-containing protein. (256 aa)
	LOC101474079	t-SNARE coiled-coil homology domain-containing protein; Belongs to the syntaxin family. (264 aa)
	rab3a	RAB3A, member RAS oncogene family, b. (238 aa)
	ENSMZEP00005021927	t-SNARE coiled-coil homology domain-containing protein; Belongs to the syntaxin family. (177 aa)
	UNC13B	Unc-13 homolog B. (1540 aa)
	rab13	Uncharacterized protein. (200 aa)
	stxbp1	Syntaxin binding protein 1a; Belongs to the STXBP/unc-18/SEC1 family. (603 aa)
	stx10	Syntaxin 10. (247 aa)
	stxbp2	Syntaxin binding protein 2; Belongs to the STXBP/unc-18/SEC1 family. (592 aa)
	LOC101463869	t-SNARE coiled-coil homology domain-containing protein. (283 aa)
	LOC101468740	Syntaxin 11a; Belongs to the syntaxin family. (293 aa)
	vps18	VPS18 core subunit of CORVET and HOPS complexes. (982 aa)
	STX7	Syntaxin 7; Belongs to the syntaxin family. (258 aa)
	stx19	t-SNARE coiled-coil homology domain-containing protein. (302 aa)
	LOC101484730	RAB15, member RAS oncogene family. (211 aa)
	rab8a	RAB8A, member RAS oncogene family. (205 aa)
	LOC101481593	Syntaxin 4; Belongs to the syntaxin family. (292 aa)
	LOC101473294	Syntaxin 2b; Belongs to the syntaxin family. (293 aa)
	UNC13C	Unc-13 homolog C. (2127 aa)
	unc13a	Uncharacterized protein. (1542 aa)
	exoc4	Exocyst complex component 4. (972 aa)
	rab3c	RAB3C, member RAS oncogene family. (242 aa)
	stx17	Syntaxin 17; Belongs to the syntaxin family. (307 aa)
	LOC101463638	RAB3B, member RAS oncogene family. (218 aa)
	rab10	RAB10, member RAS oncogene family. (193 aa)
	stx5	Syntaxin 5A; Belongs to the syntaxin family. (330 aa)
	LOC101468997	Syntaxin 1B; Belongs to the syntaxin family. (288 aa)
	LOC101485405	Uncharacterized protein. (220 aa)
	LOC101467443	Syntaxin 3A; Belongs to the syntaxin family. (288 aa)
	rab15	RAB15, member RAS oncogene family. (213 aa)
	LOC101465588	RAB3D, member RAS oncogene family, b. (222 aa)
	LOC101485528	t-SNARE coiled-coil homology domain-containing protein; Belongs to the syntaxin family. (285 aa)
	LOC101472377	Uncharacterized protein. (206 aa)
	LOC112430000	t-SNARE coiled-coil homology domain-containing protein; Belongs to the syntaxin family. (281 aa)
	LOC101480421	Zmp:0000001301. (507 aa)
	cln3	Battenin. (415 aa)

Your Current Organism:

Maylandia zebra

NCBI taxonomy Id: 106582
Other names: M. zebra, Metriaclima zebra, Pseudotropheus zebra, zebra mbuna

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSMZEP00005021927	ENSMZEP00005027515	ENSMZEP00005021927	ENSMZEP00005027515	t-SNARE coiled-coil homology domain-containing protein; Belongs to the syntaxin family.	Uncharacterized protein.	0.495
ENSMZEP00005021927	ENSMZEP00005028002	ENSMZEP00005021927	ENSMZEP00005028002	t-SNARE coiled-coil homology domain-containing protein; Belongs to the syntaxin family.	t-SNARE coiled-coil homology domain-containing protein; Belongs to the syntaxin family.	0.420
ENSMZEP00005021927	ENSMZEP00005033264	ENSMZEP00005021927	ENSMZEP00005033264	t-SNARE coiled-coil homology domain-containing protein; Belongs to the syntaxin family.	Uncharacterized protein.	0.403
ENSMZEP00005021927	LOC101470530	ENSMZEP00005021927	ENSMZEP00005023807	t-SNARE coiled-coil homology domain-containing protein; Belongs to the syntaxin family.	Syntaxin binding protein 1b; Belongs to the STXBP/unc-18/SEC1 family.	0.765
ENSMZEP00005021927	LOC101472458	ENSMZEP00005021927	ENSMZEP00005027977	t-SNARE coiled-coil homology domain-containing protein; Belongs to the syntaxin family.	Syntaxin 6; Belongs to the syntaxin family.	0.420
ENSMZEP00005021927	LOC101482480	ENSMZEP00005021927	ENSMZEP00005034282	t-SNARE coiled-coil homology domain-containing protein; Belongs to the syntaxin family.	Unc-13 homolog A.	0.508
ENSMZEP00005021927	STX7	ENSMZEP00005021927	ENSMZEP00005017268	t-SNARE coiled-coil homology domain-containing protein; Belongs to the syntaxin family.	Syntaxin 7; Belongs to the syntaxin family.	0.439
ENSMZEP00005021927	UNC13B	ENSMZEP00005021927	ENSMZEP00005021437	t-SNARE coiled-coil homology domain-containing protein; Belongs to the syntaxin family.	Unc-13 homolog B.	0.495
ENSMZEP00005021927	UNC13C	ENSMZEP00005021927	ENSMZEP00005010310	t-SNARE coiled-coil homology domain-containing protein; Belongs to the syntaxin family.	Unc-13 homolog C.	0.495
ENSMZEP00005021927	stx10	ENSMZEP00005021927	ENSMZEP00005019265	t-SNARE coiled-coil homology domain-containing protein; Belongs to the syntaxin family.	Syntaxin 10.	0.420
ENSMZEP00005021927	stx12	ENSMZEP00005021927	ENSMZEP00005023722	t-SNARE coiled-coil homology domain-containing protein; Belongs to the syntaxin family.	Syntaxin 12; Belongs to the syntaxin family.	0.439
ENSMZEP00005021927	stx16	ENSMZEP00005021927	ENSMZEP00005030755	t-SNARE coiled-coil homology domain-containing protein; Belongs to the syntaxin family.	Syntaxin 16; Belongs to the syntaxin family.	0.503
ENSMZEP00005021927	stx17	ENSMZEP00005021927	ENSMZEP00005007167	t-SNARE coiled-coil homology domain-containing protein; Belongs to the syntaxin family.	Syntaxin 17; Belongs to the syntaxin family.	0.411
ENSMZEP00005021927	stx5	ENSMZEP00005021927	ENSMZEP00005006515	t-SNARE coiled-coil homology domain-containing protein; Belongs to the syntaxin family.	Syntaxin 5A; Belongs to the syntaxin family.	0.686
ENSMZEP00005021927	stx8	ENSMZEP00005021927	ENSMZEP00005032087	t-SNARE coiled-coil homology domain-containing protein; Belongs to the syntaxin family.	t-SNARE coiled-coil homology domain-containing protein.	0.518
ENSMZEP00005021927	stxbp1	ENSMZEP00005021927	ENSMZEP00005020140	t-SNARE coiled-coil homology domain-containing protein; Belongs to the syntaxin family.	Syntaxin binding protein 1a; Belongs to the STXBP/unc-18/SEC1 family.	0.786
ENSMZEP00005021927	stxbp2	ENSMZEP00005021927	ENSMZEP00005018818	t-SNARE coiled-coil homology domain-containing protein; Belongs to the syntaxin family.	Syntaxin binding protein 2; Belongs to the STXBP/unc-18/SEC1 family.	0.765
ENSMZEP00005021927	stxbp3	ENSMZEP00005021927	ENSMZEP00005025320	t-SNARE coiled-coil homology domain-containing protein; Belongs to the syntaxin family.	Syntaxin binding protein 3; Belongs to the STXBP/unc-18/SEC1 family.	0.761
ENSMZEP00005021927	unc13a	ENSMZEP00005021927	ENSMZEP00005009305	t-SNARE coiled-coil homology domain-containing protein; Belongs to the syntaxin family.	Uncharacterized protein.	0.508
ENSMZEP00005023613	ENSMZEP00005027515	ENSMZEP00005023613	ENSMZEP00005027515	t-SNARE coiled-coil homology domain-containing protein.	Uncharacterized protein.	0.439