STRINGSTRING
LOC101487442 LOC101487442 LOC101470489 LOC101470489 LOC101485614 LOC101485614 ptcd2 ptcd2 LOC101480413 LOC101480413 TNNC1 TNNC1 LOC101473892 LOC101473892 EDNRA EDNRA nkx2-5 nkx2-5 ednra ednra HAND1 HAND1 zfpm2 zfpm2 LOC101487770 LOC101487770 med1 med1 LOC101467180 LOC101467180 LOC101485383 LOC101485383 LOC101481185 LOC101481185
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
LOC101487442Troponin I type 1b (skeletal, slow). (190 aa)
LOC101470489Troponin C type 1b (slow). (161 aa)
LOC101485614Mothers against decapentaplegic homolog. (510 aa)
ptcd2Pentatricopeptide repeat domain 2. (388 aa)
LOC101480413Troponin I type 1a (skeletal, slow). (185 aa)
TNNC1Troponin C type 1a (slow). (161 aa)
LOC101473892Transforming growth factor beta; Belongs to the TGF-beta family. (383 aa)
EDNRAEndothelin receptor type A; Belongs to the G-protein coupled receptor 1 family. (445 aa)
nkx2-5NK2 homeobox 5. (320 aa)
ednraEndothelin receptor type Aa; Belongs to the G-protein coupled receptor 1 family. (442 aa)
HAND1Heart and neural crest derivatives expressed 1. (191 aa)
zfpm2Zinc finger protein, FOG family member 2a. (1169 aa)
LOC101487770Myostatin b. (376 aa)
med1Mediator of RNA polymerase II transcription subunit 1; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors. (1752 aa)
LOC101467180Mothers against decapentaplegic homolog. (494 aa)
LOC101485383Mothers against decapentaplegic homolog. (606 aa)
LOC101481185Mothers against decapentaplegic homolog. (503 aa)
Your Current Organism:
Maylandia zebra
NCBI taxonomy Id: 106582
Other names: M. zebra, Metriaclima zebra, Pseudotropheus zebra, zebra mbuna
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