STRINGSTRING
ruvbl2 ruvbl2 ruvbl1 ruvbl1 nkx2-5 nkx2-5 LOC101464295 LOC101464295 larp7 larp7 ENSMZEP00005001373 ENSMZEP00005001373 Ctdp1 Ctdp1 ENSMZEP00005001300 ENSMZEP00005001300 sav1 sav1 zfpm2 zfpm2 vgll4 vgll4 tbx20 tbx20 rusc1 rusc1 parp2 parp2 LOC101471340 LOC101471340 edn1 edn1 LOC101476713 LOC101476713 LOC101476551 LOC101476551
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
ruvbl2RuvB-like helicase; Proposed core component of the chromatin remodeling Ino80 complex which exhibits DNA- and nucleosome-activated ATPase activity and catalyzes ATP-dependent nucleosome sliding. (459 aa)
ruvbl1RuvB-like helicase; Proposed core component of the chromatin remodeling Ino80 complex which exhibits DNA- and nucleosome-activated ATPase activity and catalyzes ATP-dependent nucleosome sliding. (456 aa)
nkx2-5NK2 homeobox 5. (320 aa)
LOC101464295Protein Wnt; Ligand for members of the frizzled family of seven transmembrane receptors; Belongs to the Wnt family. (385 aa)
larp7La ribonucleoprotein domain family, member 7. (561 aa)
ENSMZEP00005001373Uncharacterized protein. (1075 aa)
Ctdp1FCP1 homology domain-containing protein. (278 aa)
ENSMZEP00005001300FCP1_C domain-containing protein. (153 aa)
sav1Salvador family WW domain containing protein 1. (414 aa)
zfpm2Zinc finger protein, FOG family member 2a. (1169 aa)
vgll4Vestigial-like family member 4b. (310 aa)
tbx20T-box transcription factor 20. (437 aa)
rusc1RUN and SH3 domain containing 1. (1211 aa)
parp2Poly [ADP-ribose] polymerase. (641 aa)
LOC101471340Vestigial-like family member 4a. (253 aa)
edn1Endothelin 1. (201 aa)
LOC101476713SCP domain-containing protein; Belongs to the CRISP family. (394 aa)
LOC101476551Protein Wnt; Ligand for members of the frizzled family of seven transmembrane receptors; Belongs to the Wnt family. (392 aa)
Your Current Organism:
Maylandia zebra
NCBI taxonomy Id: 106582
Other names: M. zebra, Metriaclima zebra, Pseudotropheus zebra, zebra mbuna
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