31 items (Maylandia zebra) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	LOC101471717	Pleckstrin homology domain containing, family A (phosphoinositide binding specific) member 1b. (407 aa)
	tnfaip3	Tumor necrosis factor, alpha-induced protein 3. (818 aa)
	ENSMZEP00005001437	C2H2-type domain-containing protein. (308 aa)
	znf277	Zinc finger protein 277. (457 aa)
	oser1	Oxidative stress responsive serine-rich 1. (357 aa)
	sirt1	Deacetylase sirtuin-type domain-containing protein. (715 aa)
	ect2	Epithelial cell transforming 2. (939 aa)
	LOC101487279	Cytochrome P450, family 1, subfamily B, polypeptide 1; Belongs to the cytochrome P450 family. (573 aa)
	LOC101474873	Lysine (K)-specific demethylase 6B, b. (1737 aa)
	park7	Parkinson protein 7. (189 aa)
	smpd3	Sphingomyelin phosphodiesterase 3, neutral. (721 aa)
	ankzf1	Ankyrin repeat and zinc finger peptidyl tRNA hydrolase 1. (740 aa)
	FXN	Uncharacterized protein. (133 aa)
	aifm1	Apoptosis inducing factor mitochondrion associated 1. (650 aa)
	kdm6b	Lysine (K)-specific demethylase 6B, a. (2185 aa)
	ENSMZEP00005026351	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily. (311 aa)
	ENSMZEP00005026360	Protein kinase domain-containing protein. (313 aa)
	nfe2l2	Nuclear factor, erythroid 2-like 2a. (581 aa)
	ENSMZEP00005001498	Uncharacterized protein. (273 aa)
	impact	Impact RWD domain protein. (319 aa)
	ENSMZEP00005028406	Receptor-interacting serine-threonine kinase 3. (326 aa)
	trpa1	Transient receptor potential cation channel, subfamily A, member 1b; Belongs to the transient receptor (TC 1.A.4) family. (1128 aa)
	ENSMZEP00005031626	Uncharacterized protein. (133 aa)
	ENSMZEP00005032489	zf-C2H2_2 domain-containing protein. (267 aa)
	LOC101477423	Aquaporin 1a (Colton blood group), tandem duplicate 2; Belongs to the MIP/aquaporin (TC 1.A.8) family. (267 aa)
	LOC101477702	Uncharacterized protein; Belongs to the MIP/aquaporin (TC 1.A.8) family. (258 aa)
	LOC101477140	Aquaporin 1a (Colton blood group), tandem duplicate 1; Belongs to the MIP/aquaporin (TC 1.A.8) family. (261 aa)
	ripk1	Receptor (TNFRSF)-interacting serine-threonine kinase 1, like. (678 aa)
	LOC112434479	C2H2-type domain-containing protein. (308 aa)
	edn1	Endothelin 1. (201 aa)
	ENSMZEP00005036203	Cytochrome P450, family 1, subfamily C, polypeptide 1; Belongs to the cytochrome P450 family. (527 aa)

Your Current Organism:

Maylandia zebra

NCBI taxonomy Id: 106582
Other names: M. zebra, Metriaclima zebra, Pseudotropheus zebra, zebra mbuna

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structured XML interaction data, according to the 'PSI-MI' data standard

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node degree of proteins in your network (given the current score cut-off)

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a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSMZEP00005026351	ENSMZEP00005028406	ENSMZEP00005026351	ENSMZEP00005028406	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.	Receptor-interacting serine-threonine kinase 3.	0.903
ENSMZEP00005026351	ripk1	ENSMZEP00005026351	ENSMZEP00005033604	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.	Receptor (TNFRSF)-interacting serine-threonine kinase 1, like.	0.996
ENSMZEP00005026351	tnfaip3	ENSMZEP00005026351	ENSMZEP00005036736	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.	Tumor necrosis factor, alpha-induced protein 3.	0.955
ENSMZEP00005026360	ripk1	ENSMZEP00005026360	ENSMZEP00005033604	Protein kinase domain-containing protein.	Receptor (TNFRSF)-interacting serine-threonine kinase 1, like.	0.966
ENSMZEP00005026360	tnfaip3	ENSMZEP00005026360	ENSMZEP00005036736	Protein kinase domain-containing protein.	Tumor necrosis factor, alpha-induced protein 3.	0.569
ENSMZEP00005028406	ENSMZEP00005026351	ENSMZEP00005028406	ENSMZEP00005026351	Receptor-interacting serine-threonine kinase 3.	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.	0.903
ENSMZEP00005028406	ripk1	ENSMZEP00005028406	ENSMZEP00005033604	Receptor-interacting serine-threonine kinase 3.	Receptor (TNFRSF)-interacting serine-threonine kinase 1, like.	0.997
ENSMZEP00005028406	tnfaip3	ENSMZEP00005028406	ENSMZEP00005036736	Receptor-interacting serine-threonine kinase 3.	Tumor necrosis factor, alpha-induced protein 3.	0.955
ENSMZEP00005031626	FXN	ENSMZEP00005031626	ENSMZEP00005024671	Uncharacterized protein.	Uncharacterized protein.	0.900
FXN	ENSMZEP00005031626	ENSMZEP00005024671	ENSMZEP00005031626	Uncharacterized protein.	Uncharacterized protein.	0.900
LOC101471717	LOC101474873	ENSMZEP00005013761	ENSMZEP00005018325	Pleckstrin homology domain containing, family A (phosphoinositide binding specific) member 1b.	Lysine (K)-specific demethylase 6B, b.	0.712
LOC101471717	kdm6b	ENSMZEP00005013761	ENSMZEP00005006107	Pleckstrin homology domain containing, family A (phosphoinositide binding specific) member 1b.	Lysine (K)-specific demethylase 6B, a.	0.712
LOC101474873	LOC101471717	ENSMZEP00005018325	ENSMZEP00005013761	Lysine (K)-specific demethylase 6B, b.	Pleckstrin homology domain containing, family A (phosphoinositide binding specific) member 1b.	0.712
kdm6b	LOC101471717	ENSMZEP00005006107	ENSMZEP00005013761	Lysine (K)-specific demethylase 6B, a.	Pleckstrin homology domain containing, family A (phosphoinositide binding specific) member 1b.	0.712
nfe2l2	park7	ENSMZEP00005006005	ENSMZEP00005018701	Nuclear factor, erythroid 2-like 2a.	Parkinson protein 7.	0.402
nfe2l2	sirt1	ENSMZEP00005006005	ENSMZEP00005014854	Nuclear factor, erythroid 2-like 2a.	Deacetylase sirtuin-type domain-containing protein.	0.439
park7	nfe2l2	ENSMZEP00005018701	ENSMZEP00005006005	Parkinson protein 7.	Nuclear factor, erythroid 2-like 2a.	0.402
ripk1	ENSMZEP00005026351	ENSMZEP00005033604	ENSMZEP00005026351	Receptor (TNFRSF)-interacting serine-threonine kinase 1, like.	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.	0.996
ripk1	ENSMZEP00005026360	ENSMZEP00005033604	ENSMZEP00005026360	Receptor (TNFRSF)-interacting serine-threonine kinase 1, like.	Protein kinase domain-containing protein.	0.966
ripk1	ENSMZEP00005028406	ENSMZEP00005033604	ENSMZEP00005028406	Receptor (TNFRSF)-interacting serine-threonine kinase 1, like.	Receptor-interacting serine-threonine kinase 3.	0.997