40 items (Maylandia zebra) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	ntng2	Netrin g2a. (546 aa)
	LOC101469474	Uncharacterized protein. (1755 aa)
	ntng1	Netrin g1a. (528 aa)
	MFAP4	Microfibril associated protein 4. (238 aa)
	smpd3	Sphingomyelin phosphodiesterase 3, neutral. (721 aa)
	ntn4	Netrin 4. (591 aa)
	LOC101464850	Fibrinogen C-terminal domain-containing protein. (247 aa)
	LOC101484734	Fibrinogen C-terminal domain-containing protein. (249 aa)
	has1	Hyaluronan synthase 1. (576 aa)
	fbln5	Fibulin 5. (463 aa)
	LOC111500593	Fibrinogen C-terminal domain-containing protein. (236 aa)
	LOC101479783	Si:dkey-202e22.2. (561 aa)
	LOC101476643	Hyaluronan and proteoglycan link protein 2. (357 aa)
	LOC101472092	Uncharacterized protein. (201 aa)
	has2	Hyaluronan synthase 2. (552 aa)
	LOC101465286	Fibrinogen C-terminal domain-containing protein. (239 aa)
	LOC101472509	Uncharacterized protein. (651 aa)
	lamb3	Uncharacterized protein. (1158 aa)
	LOC101468240	Elastin microfibril interfacer 1b. (1086 aa)
	pxdn	Peroxidasin. (1480 aa)
	ENSMZEP00005003867	Netrin G2. (524 aa)
	gas6	Uncharacterized protein. (649 aa)
	LOC101478630	Elastin microfibril interfacer 1a. (1018 aa)
	LOC101481347	Laminin, beta 1b. (1779 aa)
	LOC112429902	Laminin, beta 1a. (1729 aa)
	ENSMZEP00005036134	Uncharacterized protein. (461 aa)
	ENSMZEP00005036132	Uncharacterized protein. (470 aa)
	ENSMZEP00005035908	Fibrinogen C-terminal domain-containing protein. (236 aa)
	ENSMZEP00005035670	Fibrinogen C-terminal domain-containing protein. (212 aa)
	LOC101483355	Fibrinogen C-terminal domain-containing protein. (248 aa)
	ENSMZEP00005033046	Si:dkey-202e22.2. (515 aa)
	LOC101468010	Vav 3 guanine nucleotide exchange factor b. (461 aa)
	LOC101473892	Transforming growth factor beta; Belongs to the TGF-beta family. (383 aa)
	has3	Hyaluronan synthase 3. (554 aa)
	fkbp10	Peptidylprolyl isomerase. (566 aa)
	ENSMZEP00005030510	EMI domain-containing protein. (178 aa)
	ramp2	Receptor (G protein-coupled) activity modifying protein 2. (239 aa)
	LOC101470464	Laminin, beta 2 (laminin S). (1797 aa)
	LOC101470954	Laminin, beta 2-like. (1850 aa)
	LOC101468632	FK506-binding protein. (483 aa)

Your Current Organism:

Maylandia zebra

NCBI taxonomy Id: 106582
Other names: M. zebra, Metriaclima zebra, Pseudotropheus zebra, zebra mbuna

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structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

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node degree of proteins in your network (given the current score cut-off)

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a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSMZEP00005035670	fbln5	ENSMZEP00005035670	ENSMZEP00005014677	Fibrinogen C-terminal domain-containing protein.	Fibulin 5.	0.502
ENSMZEP00005035908	fbln5	ENSMZEP00005035908	ENSMZEP00005014677	Fibrinogen C-terminal domain-containing protein.	Fibulin 5.	0.502
ENSMZEP00005036132	ENSMZEP00005036134	ENSMZEP00005036132	ENSMZEP00005036134	Uncharacterized protein.	Uncharacterized protein.	0.817
ENSMZEP00005036132	LOC101483355	ENSMZEP00005036132	ENSMZEP00005035666	Uncharacterized protein.	Fibrinogen C-terminal domain-containing protein.	0.532
ENSMZEP00005036132	LOC101484734	ENSMZEP00005036132	ENSMZEP00005017587	Uncharacterized protein.	Fibrinogen C-terminal domain-containing protein.	0.467
ENSMZEP00005036132	LOC111500593	ENSMZEP00005036132	ENSMZEP00005013497	Uncharacterized protein.	Fibrinogen C-terminal domain-containing protein.	0.453
ENSMZEP00005036134	ENSMZEP00005036132	ENSMZEP00005036134	ENSMZEP00005036132	Uncharacterized protein.	Uncharacterized protein.	0.817
LOC101464850	fbln5	ENSMZEP00005017686	ENSMZEP00005014677	Fibrinogen C-terminal domain-containing protein.	Fibulin 5.	0.502
LOC101465286	fbln5	ENSMZEP00005009528	ENSMZEP00005014677	Fibrinogen C-terminal domain-containing protein.	Fibulin 5.	0.502
LOC101468010	ntng1	ENSMZEP00005032697	ENSMZEP00005027103	Vav 3 guanine nucleotide exchange factor b.	Netrin g1a.	0.901
LOC101472092	ramp2	ENSMZEP00005012250	ENSMZEP00005030393	Uncharacterized protein.	Receptor (G protein-coupled) activity modifying protein 2.	0.900
LOC101473892	pxdn	ENSMZEP00005032584	ENSMZEP00005005375	Transforming growth factor beta; Belongs to the TGF-beta family.	Peroxidasin.	0.474
LOC101483355	ENSMZEP00005036132	ENSMZEP00005035666	ENSMZEP00005036132	Fibrinogen C-terminal domain-containing protein.	Uncharacterized protein.	0.532
LOC101483355	fbln5	ENSMZEP00005035666	ENSMZEP00005014677	Fibrinogen C-terminal domain-containing protein.	Fibulin 5.	0.502
LOC101484734	ENSMZEP00005036132	ENSMZEP00005017587	ENSMZEP00005036132	Fibrinogen C-terminal domain-containing protein.	Uncharacterized protein.	0.467
LOC101484734	fbln5	ENSMZEP00005017587	ENSMZEP00005014677	Fibrinogen C-terminal domain-containing protein.	Fibulin 5.	0.502
LOC111500593	ENSMZEP00005036132	ENSMZEP00005013497	ENSMZEP00005036132	Fibrinogen C-terminal domain-containing protein.	Uncharacterized protein.	0.453
LOC111500593	fbln5	ENSMZEP00005013497	ENSMZEP00005014677	Fibrinogen C-terminal domain-containing protein.	Fibulin 5.	0.502
MFAP4	fbln5	ENSMZEP00005021364	ENSMZEP00005014677	Microfibril associated protein 4.	Fibulin 5.	0.502
fbln5	ENSMZEP00005035670	ENSMZEP00005014677	ENSMZEP00005035670	Fibulin 5.	Fibrinogen C-terminal domain-containing protein.	0.502