STRINGSTRING
rnf19a rnf19a LOC101475930 LOC101475930 LOC101465581 LOC101465581 usp8 usp8 LOC101474259 LOC101474259 ppp3r1 ppp3r1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
rnf19aRBR-type E3 ubiquitin transferase. (889 aa)
LOC101475930RBR-type E3 ubiquitin transferase. (849 aa)
LOC101465581Protein phosphatase 3 (formerly 2B), regulatory s1ubunit B, alpha isoform, b. (169 aa)
usp8Ubiquitin specific peptidase 8; Belongs to the peptidase C19 family. (1063 aa)
LOC101474259RBR-type E3 ubiquitin transferase. (654 aa)
ppp3r1Uncharacterized protein. (178 aa)
Your Current Organism:
Maylandia zebra
NCBI taxonomy Id: 106582
Other names: M. zebra, Metriaclima zebra, Pseudotropheus zebra, zebra mbuna
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