19 items (Maylandia zebra) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	Gramd1a	GRAM domain-containing protein. (243 aa)
	LOC101469343	Apolipoprotein Bb, tandem duplicate 2. (3682 aa)
	ENSMZEP00005000347	Vitellogenin domain-containing protein. (763 aa)
	ENSMZEP00005000375	Uncharacterized protein. (420 aa)
	LOC101484273	START domain-containing protein. (278 aa)
	cetp	Cholesteryl ester transfer protein; Involved in the transfer of neutral lipids, including cholesteryl ester and triglyceride, among lipoprotein particles. Allows the net movement of cholesteryl ester from high density lipoproteins/HDL to triglyceride-rich very low density lipoproteins/VLDL, and the equimolar transport of triglyceride from VLDL to HDL; Belongs to the BPI/LBP/Plunc superfamily. BPI/LBP family. (499 aa)
	apob	Apolipoprotein Ba. (4368 aa)
	pltp	Phospholipid transfer protein. (495 aa)
	scp2	Uncharacterized protein; Belongs to the thiolase-like superfamily. Thiolase family. (562 aa)
	abcg5	ATP-binding cassette, sub-family G (WHITE), member 5. (656 aa)
	abcg8	ATP-binding cassette, sub-family G (WHITE), member 8. (668 aa)
	stard3	StAR-related lipid transfer (START) domain containing 3. (454 aa)
	mttp	Microsomal triglyceride transfer protein. (886 aa)
	gramd1c	GRAM domain containing 1c. (657 aa)
	stard5	StAR-related lipid transfer (START) domain containing 5. (211 aa)
	ENSMZEP00005017649	Uncharacterized protein. (151 aa)
	gramd1b	GRAM domain containing 1Bb. (736 aa)
	podn	Podocan. (586 aa)
	star	Steroidogenic acute regulatory protein, mitochondrial; Plays a key role in steroid hormone synthesis by enhancing the metabolism of cholesterol into pregnenolone. Mediates the transfer of cholesterol from the outer mitochondrial membrane to the inner mitochondrial membrane where it is cleaved to pregnenolone. (322 aa)

Your Current Organism:

Maylandia zebra

NCBI taxonomy Id: 106582
Other names: M. zebra, Metriaclima zebra, Pseudotropheus zebra, zebra mbuna

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSMZEP00005000347	ENSMZEP00005000375	ENSMZEP00005000347	ENSMZEP00005000375	Vitellogenin domain-containing protein.	Uncharacterized protein.	0.562
ENSMZEP00005000347	cetp	ENSMZEP00005000347	ENSMZEP00005003668	Vitellogenin domain-containing protein.	Cholesteryl ester transfer protein; Involved in the transfer of neutral lipids, including cholesteryl ester and triglyceride, among lipoprotein particles. Allows the net movement of cholesteryl ester from high density lipoproteins/HDL to triglyceride-rich very low density lipoproteins/VLDL, and the equimolar transport of triglyceride from VLDL to HDL; Belongs to the BPI/LBP/Plunc superfamily. BPI/LBP family.	0.701
ENSMZEP00005000347	mttp	ENSMZEP00005000347	ENSMZEP00005030331	Vitellogenin domain-containing protein.	Microsomal triglyceride transfer protein.	0.897
ENSMZEP00005000347	pltp	ENSMZEP00005000347	ENSMZEP00005011700	Vitellogenin domain-containing protein.	Phospholipid transfer protein.	0.473
ENSMZEP00005000375	ENSMZEP00005000347	ENSMZEP00005000375	ENSMZEP00005000347	Uncharacterized protein.	Vitellogenin domain-containing protein.	0.562
ENSMZEP00005000375	cetp	ENSMZEP00005000375	ENSMZEP00005003668	Uncharacterized protein.	Cholesteryl ester transfer protein; Involved in the transfer of neutral lipids, including cholesteryl ester and triglyceride, among lipoprotein particles. Allows the net movement of cholesteryl ester from high density lipoproteins/HDL to triglyceride-rich very low density lipoproteins/VLDL, and the equimolar transport of triglyceride from VLDL to HDL; Belongs to the BPI/LBP/Plunc superfamily. BPI/LBP family.	0.701
ENSMZEP00005000375	mttp	ENSMZEP00005000375	ENSMZEP00005030331	Uncharacterized protein.	Microsomal triglyceride transfer protein.	0.897
ENSMZEP00005000375	pltp	ENSMZEP00005000375	ENSMZEP00005011700	Uncharacterized protein.	Phospholipid transfer protein.	0.473
ENSMZEP00005017649	Gramd1a	ENSMZEP00005017649	ENSMZEP00005021179	Uncharacterized protein.	GRAM domain-containing protein.	0.602
ENSMZEP00005017649	gramd1b	ENSMZEP00005017649	ENSMZEP00005017525	Uncharacterized protein.	GRAM domain containing 1Bb.	0.800
ENSMZEP00005017649	gramd1c	ENSMZEP00005017649	ENSMZEP00005029420	Uncharacterized protein.	GRAM domain containing 1c.	0.523
Gramd1a	ENSMZEP00005017649	ENSMZEP00005021179	ENSMZEP00005017649	GRAM domain-containing protein.	Uncharacterized protein.	0.602
LOC101469343	cetp	ENSMZEP00005000160	ENSMZEP00005003668	Apolipoprotein Bb, tandem duplicate 2.	Cholesteryl ester transfer protein; Involved in the transfer of neutral lipids, including cholesteryl ester and triglyceride, among lipoprotein particles. Allows the net movement of cholesteryl ester from high density lipoproteins/HDL to triglyceride-rich very low density lipoproteins/VLDL, and the equimolar transport of triglyceride from VLDL to HDL; Belongs to the BPI/LBP/Plunc superfamily. BPI/LBP family.	0.701
LOC101469343	mttp	ENSMZEP00005000160	ENSMZEP00005030331	Apolipoprotein Bb, tandem duplicate 2.	Microsomal triglyceride transfer protein.	0.897
LOC101469343	pltp	ENSMZEP00005000160	ENSMZEP00005011700	Apolipoprotein Bb, tandem duplicate 2.	Phospholipid transfer protein.	0.473
LOC101484273	scp2	ENSMZEP00005001003	ENSMZEP00005013224	START domain-containing protein.	Uncharacterized protein; Belongs to the thiolase-like superfamily. Thiolase family.	0.414
LOC101484273	star	ENSMZEP00005001003	ENSMZEP00005013657	START domain-containing protein.	Steroidogenic acute regulatory protein, mitochondrial; Plays a key role in steroid hormone synthesis by enhancing the metabolism of cholesterol into pregnenolone. Mediates the transfer of cholesterol from the outer mitochondrial membrane to the inner mitochondrial membrane where it is cleaved to pregnenolone.	0.781
LOC101484273	stard3	ENSMZEP00005001003	ENSMZEP00005030634	START domain-containing protein.	StAR-related lipid transfer (START) domain containing 3.	0.773
LOC101484273	stard5	ENSMZEP00005001003	ENSMZEP00005022575	START domain-containing protein.	StAR-related lipid transfer (START) domain containing 5.	0.605
abcg5	abcg8	ENSMZEP00005036723	ENSMZEP00005036722	ATP-binding cassette, sub-family G (WHITE), member 5.	ATP-binding cassette, sub-family G (WHITE), member 8.	0.999