STRINGSTRING
LOC101479683 LOC101479683 nr1d2 nr1d2 LOC101468893 LOC101468893 atoh8 atoh8 DDX5 DDX5 LOC101464394 LOC101464394 LOC101470166 LOC101470166 LOC101484278 LOC101484278 LOC101484439 LOC101484439 LOC101478664 LOC101478664 LOC105941472 LOC105941472
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
LOC101479683Nuclear receptor subfamily 1, group D, member 2a. (597 aa)
nr1d2Nuclear receptor subfamily 1, group D, member 2b. (590 aa)
LOC101468893Nuclear receptor subfamily 1, group D, member 4a. (581 aa)
atoh8BHLH domain-containing protein. (334 aa)
DDX5DEAD-box helicase 5; Belongs to the DEAD box helicase family. (633 aa)
LOC101464394RNA binding motif protein 24a. (243 aa)
LOC101470166DEAD (Asp-Glu-Ala-Asp) box helicase 5; Belongs to the DEAD box helicase family. (624 aa)
LOC101484278Uncharacterized protein; Belongs to the DEAD box helicase family. (623 aa)
LOC101484439Uncharacterized protein; Belongs to the DEAD box helicase family. (652 aa)
LOC101478664Ubiquinol-cytochrome c reductase complex assembly factor 2. (129 aa)
LOC105941472RNA binding motif protein 24b. (235 aa)
Your Current Organism:
Maylandia zebra
NCBI taxonomy Id: 106582
Other names: M. zebra, Metriaclima zebra, Pseudotropheus zebra, zebra mbuna
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