72 items (Maylandia zebra) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	LOC101464765	Ribosomal protein L10. (215 aa)
	MRPL49	Mitochondrial ribosomal protein L49. (172 aa)
	mrpl18	Mitochondrial ribosomal protein L18. (189 aa)
	rpl29	60S ribosomal protein L29; Belongs to the eukaryotic ribosomal protein eL29 family. (64 aa)
	mrps30	Mitochondrial ribosomal protein S30. (420 aa)
	mrpl55	Zgc:171480. (138 aa)
	RPL19	Ribosomal protein L19; Belongs to the eukaryotic ribosomal protein eL19 family. (197 aa)
	mpv17l2	MPV17 mitochondrial membrane protein-like 2; Belongs to the peroxisomal membrane protein PXMP2/4 family. (218 aa)
	mrpl28	Mitochondrial ribosomal protein L28. (251 aa)
	rpl15	Ribosomal protein L15; Belongs to the eukaryotic ribosomal protein eL15 family. (204 aa)
	mrpl23	Mitochondrial ribosomal protein L23. (158 aa)
	mrpl51	Mitochondrial ribosomal protein L51. (131 aa)
	rpl35	Ribosomal protein L35. (123 aa)
	mrpl19	Mitochondrial ribosomal protein L19. (285 aa)
	mrpl15	Mitochondrial ribosomal protein L15. (296 aa)
	rpl18a	60S ribosomal protein L18a; Belongs to the eukaryotic ribosomal protein eL20 family. (176 aa)
	mrpl37	Mitochondrial ribosomal protein L37. (432 aa)
	LOC101481499	Mitochondrial transcription termination factor 4. (336 aa)
	mrpl52	Mitochondrial ribosomal protein L52. (129 aa)
	mrpl48	Mitochondrial ribosomal protein L48. (212 aa)
	mrpl12	Mitochondrial ribosomal protein L12. (195 aa)
	ENSMZEP00005028966	Uncharacterized protein. (137 aa)
	mrpl30	Mitochondrial ribosomal protein L30. (160 aa)
	rpl4	Ribosomal protein L4. (369 aa)
	RPL19-2	Ribosomal protein L19; Belongs to the eukaryotic ribosomal protein eL19 family. (194 aa)
	rpl32	Ribosomal protein L32. (135 aa)
	rpl9	Ribosomal protein L9. (260 aa)
	mrpl13	Mitochondrial ribosomal protein L13. (179 aa)
	ENSMZEP00005034671	Uncharacterized protein. (99 aa)
	ENSMZEP00005034867	Uncharacterized protein. (148 aa)
	mrpl24	Mitochondrial ribosomal protein L24. (216 aa)
	rplp1	Ribosomal protein, large, P1; Belongs to the eukaryotic ribosomal protein P1/P2 family. (114 aa)
	ENSMZEP00005037597	Ribosomal_L16 domain-containing protein. (145 aa)
	LOC101483180	39S ribosomal protein L53, mitochondrial. (108 aa)
	LOC112433107	Mitochondrial ribosomal protein L12. (195 aa)
	mrpl20	Mitochondrial ribosomal protein L20; Belongs to the bacterial ribosomal protein bL20 family. (149 aa)
	mrpl2	Mitochondrial ribosomal protein L2. (298 aa)
	rpl6	Ribosomal protein L6. (295 aa)
	mrpl40	Mitochondrial ribosomal protein L40. (203 aa)
	mrpl33	Mitochondrial ribosomal protein L33. (60 aa)
	mrpl14	Mitochondrial ribosomal protein L14. (148 aa)
	mrpl54	Mitochondrial ribosomal protein L54. (169 aa)
	LOC101484456	Ribosomal protein L26. (145 aa)
	LOC101467350	Ribosomal protein L36A; Belongs to the eukaryotic ribosomal protein eL42 family. (113 aa)
	mrpl42	Mitochondrial ribosomal protein L42. (150 aa)
	mrpl35	Mitochondrial ribosomal protein L35. (175 aa)
	mrpl10	Mitochondrial ribosomal protein L10. (252 aa)
	rpl31	Ribosomal protein L31. (124 aa)
	mrpl32	Mitochondrial ribosomal protein L32. (181 aa)
	ccdc32	Coiled-coil domain containing 32. (202 aa)
	mrpl3	Mitochondrial ribosomal protein L3; Belongs to the universal ribosomal protein uL3 family. (342 aa)
	mrpl38	Mitochondrial ribosomal protein L38. (386 aa)
	mrpl43	Mitochondrial ribosomal protein L43. (151 aa)
	LOC101476840	Mitochondrial ribosomal protein L4. (302 aa)
	zcchc17	Zinc finger, CCHC domain containing 17. (248 aa)
	mrpl39	Mitochondrial ribosomal protein L39. (335 aa)
	mrpl45	Mitochondrial ribosomal protein L45. (315 aa)
	mrpl11	Mitochondrial ribosomal protein L11; Belongs to the universal ribosomal protein uL11 family. (195 aa)
	mrpl21	Uncharacterized protein. (195 aa)
	mrpl58	Mitochondrial ribosomal protein L58. (194 aa)
	mrpl46	Mitochondrial ribosomal protein L46. (298 aa)
	mrpl34	Mitochondrial ribosomal protein L34. (123 aa)
	mrpl41	Mitochondrial ribosomal protein L41. (135 aa)
	LOC112430263	Mitochondrial ribosomal protein L53. (108 aa)
	mrpl17	Mitochondrial ribosomal protein L17; Belongs to the bacterial ribosomal protein bL17 family. (165 aa)
	mrpl27	Mitochondrial ribosomal protein L27. (147 aa)
	rpl30	Ribosomal protein L30. (116 aa)
	mrpl47	Mitochondrial ribosomal protein L47. (259 aa)
	rpl35a	Ribosomal protein L35a. (110 aa)
	mrpl16	Mitochondrial ribosomal protein L16; Belongs to the universal ribosomal protein uL16 family. (258 aa)
	ENSMZEP00005000235	Ribosomal protein; Belongs to the bacterial ribosomal protein bL36 family. (105 aa)
	mrpl22	Mitochondrial ribosomal protein L22; Belongs to the universal ribosomal protein uL22 family. (207 aa)

Your Current Organism:

Maylandia zebra

NCBI taxonomy Id: 106582
Other names: M. zebra, Metriaclima zebra, Pseudotropheus zebra, zebra mbuna

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Export your current network:

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SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

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TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

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TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

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structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

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node degree of proteins in your network (given the current score cut-off)

... network coordinates:

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a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSMZEP00005000235	ENSMZEP00005028966	ENSMZEP00005000235	ENSMZEP00005028966	Ribosomal protein; Belongs to the bacterial ribosomal protein bL36 family.	Uncharacterized protein.	0.951
ENSMZEP00005000235	ENSMZEP00005034671	ENSMZEP00005000235	ENSMZEP00005034671	Ribosomal protein; Belongs to the bacterial ribosomal protein bL36 family.	Uncharacterized protein.	0.968
ENSMZEP00005000235	ENSMZEP00005034867	ENSMZEP00005000235	ENSMZEP00005034867	Ribosomal protein; Belongs to the bacterial ribosomal protein bL36 family.	Uncharacterized protein.	0.968
ENSMZEP00005000235	ENSMZEP00005037597	ENSMZEP00005000235	ENSMZEP00005037597	Ribosomal protein; Belongs to the bacterial ribosomal protein bL36 family.	Ribosomal_L16 domain-containing protein.	0.965
ENSMZEP00005000235	LOC101464765	ENSMZEP00005000235	ENSMZEP00005035513	Ribosomal protein; Belongs to the bacterial ribosomal protein bL36 family.	Ribosomal protein L10.	0.965
ENSMZEP00005000235	LOC101476840	ENSMZEP00005000235	ENSMZEP00005007592	Ribosomal protein; Belongs to the bacterial ribosomal protein bL36 family.	Mitochondrial ribosomal protein L4.	0.968
ENSMZEP00005000235	LOC101481499	ENSMZEP00005000235	ENSMZEP00005026332	Ribosomal protein; Belongs to the bacterial ribosomal protein bL36 family.	Mitochondrial transcription termination factor 4.	0.707
ENSMZEP00005000235	LOC101483180	ENSMZEP00005000235	ENSMZEP00005038026	Ribosomal protein; Belongs to the bacterial ribosomal protein bL36 family.	39S ribosomal protein L53, mitochondrial.	0.698
ENSMZEP00005000235	LOC101484456	ENSMZEP00005000235	ENSMZEP00005011860	Ribosomal protein; Belongs to the bacterial ribosomal protein bL36 family.	Ribosomal protein L26.	0.993
ENSMZEP00005000235	LOC112430263	ENSMZEP00005000235	ENSMZEP00005004715	Ribosomal protein; Belongs to the bacterial ribosomal protein bL36 family.	Mitochondrial ribosomal protein L53.	0.698
ENSMZEP00005000235	LOC112433107	ENSMZEP00005000235	ENSMZEP00005015715	Ribosomal protein; Belongs to the bacterial ribosomal protein bL36 family.	Mitochondrial ribosomal protein L12.	0.992
ENSMZEP00005000235	MRPL49	ENSMZEP00005000235	ENSMZEP00005016470	Ribosomal protein; Belongs to the bacterial ribosomal protein bL36 family.	Mitochondrial ribosomal protein L49.	0.951
ENSMZEP00005000235	ccdc32	ENSMZEP00005000235	ENSMZEP00005009091	Ribosomal protein; Belongs to the bacterial ribosomal protein bL36 family.	Coiled-coil domain containing 32.	0.802
ENSMZEP00005000235	mrpl10	ENSMZEP00005000235	ENSMZEP00005010646	Ribosomal protein; Belongs to the bacterial ribosomal protein bL36 family.	Mitochondrial ribosomal protein L10.	0.908
ENSMZEP00005000235	mrpl11	ENSMZEP00005000235	ENSMZEP00005007172	Ribosomal protein; Belongs to the bacterial ribosomal protein bL36 family.	Mitochondrial ribosomal protein L11; Belongs to the universal ribosomal protein uL11 family.	0.999
ENSMZEP00005000235	mrpl12	ENSMZEP00005000235	ENSMZEP00005028780	Ribosomal protein; Belongs to the bacterial ribosomal protein bL36 family.	Mitochondrial ribosomal protein L12.	0.992
ENSMZEP00005000235	mrpl13	ENSMZEP00005000235	ENSMZEP00005034119	Ribosomal protein; Belongs to the bacterial ribosomal protein bL36 family.	Mitochondrial ribosomal protein L13.	0.999
ENSMZEP00005000235	mrpl14	ENSMZEP00005000235	ENSMZEP00005012061	Ribosomal protein; Belongs to the bacterial ribosomal protein bL36 family.	Mitochondrial ribosomal protein L14.	0.972
ENSMZEP00005000235	mrpl15	ENSMZEP00005000235	ENSMZEP00005024411	Ribosomal protein; Belongs to the bacterial ribosomal protein bL36 family.	Mitochondrial ribosomal protein L15.	0.999
ENSMZEP00005000235	mrpl16	ENSMZEP00005000235	ENSMZEP00005000809	Ribosomal protein; Belongs to the bacterial ribosomal protein bL36 family.	Mitochondrial ribosomal protein L16; Belongs to the universal ribosomal protein uL16 family.	0.998