31 items (Maylandia zebra) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	rps15	Ribosomal protein S15; Belongs to the universal ribosomal protein uS19 family. (145 aa)
	LOC101479652	40S ribosomal protein SA; Required for the assembly and/or stability of the 40S ribosomal subunit. Required for the processing of the 20S rRNA- precursor to mature 18S rRNA in a late step of the maturation of 40S ribosomal subunits. Also functions as a cell surface receptor for laminin. Plays a role in cell adhesion to the basement membrane and in the consequent activation of signaling transduction pathways. May play a role in cell fate determination and tissue morphogenesis. Belongs to the universal ribosomal protein uS2 family. (370 aa)
	ENSMZEP00005003717	Uncharacterized protein. (127 aa)
	rps16	Ribosomal protein S16; Belongs to the universal ribosomal protein uS9 family. (146 aa)
	rps2	Ribosomal protein S2; Belongs to the universal ribosomal protein uS5 family. (279 aa)
	dhx29	ATP-dependent RNA helicase DHX29; ATP-binding RNA helicase involved in translation initiation. Part of the 43S pre-initiation complex that is required for efficient initiation on mRNAs of higher eukaryotes with structured 5'-UTRs by promoting efficient NTPase-dependent 48S complex formation. Specifically binds to the 40S ribosome near the mRNA entrance. Does not possess a processive helicase activity; Belongs to the DEAD box helicase family. DEAH subfamily. (1366 aa)
	RPS19	Ribosomal protein S19. (152 aa)
	rps5	Ribosomal protein S5; Belongs to the universal ribosomal protein uS7 family. (203 aa)
	ENSMZEP00005033873	Uncharacterized protein. (93 aa)
	ENSMZEP00005033469	annotation not available (114 aa)
	rps17	Uncharacterized protein. (134 aa)
	rps6	40S ribosomal protein S6; Belongs to the eukaryotic ribosomal protein eS6 family. (249 aa)
	rps11	Ribosomal protein S11; Belongs to the universal ribosomal protein uS17 family. (161 aa)
	LOC112432562	Ribosomal_S10 domain-containing protein. (110 aa)
	ENSMZEP00005029002	Uncharacterized protein. (98 aa)
	rps23	Ribosomal protein S23; Belongs to the universal ribosomal protein uS12 family. (143 aa)
	LOC101480409	Ribosomal protein S17. (156 aa)
	rps7	40S ribosomal protein S7; Belongs to the eukaryotic ribosomal protein eS7 family. (211 aa)
	rps25	40S ribosomal protein S25; Belongs to the eukaryotic ribosomal protein eS25 family. (135 aa)
	rps29	Ribosomal protein S29. (56 aa)
	fau	40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family. (133 aa)
	rps13	Ribosomal protein S13; Belongs to the universal ribosomal protein uS15 family. (151 aa)
	rps24	40S ribosomal protein S24; Belongs to the eukaryotic ribosomal protein eS24 family. (178 aa)
	ENSMZEP00005012323	40S ribosomal protein S27. (91 aa)
	Rps26	40S ribosomal protein S26; Belongs to the eukaryotic ribosomal protein eS26 family. (116 aa)
	rps3a	40S ribosomal protein S3a; Belongs to the eukaryotic ribosomal protein eS1 family. (266 aa)
	mcts1	Malignant T-cell-amplified sequence. (183 aa)
	rps28	Ribosomal protein S28. (69 aa)
	RPS20	Ribosomal protein S20. (114 aa)
	LOC101467688	Ribosomal protein S19. (146 aa)
	rps18	Ribosomal protein S18; Belongs to the universal ribosomal protein uS13 family. (152 aa)

Your Current Organism:

Maylandia zebra

NCBI taxonomy Id: 106582
Other names: M. zebra, Metriaclima zebra, Pseudotropheus zebra, zebra mbuna

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structured XML interaction data, according to the 'PSI-MI' data standard

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a flat-file format describing the coordinates and colors of nodes in the network

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSMZEP00005003717	ENSMZEP00005012323	ENSMZEP00005003717	ENSMZEP00005012323	Uncharacterized protein.	40S ribosomal protein S27.	0.925
ENSMZEP00005003717	ENSMZEP00005029002	ENSMZEP00005003717	ENSMZEP00005029002	Uncharacterized protein.	Uncharacterized protein.	0.975
ENSMZEP00005003717	ENSMZEP00005033469	ENSMZEP00005003717	ENSMZEP00005033469	Uncharacterized protein.	annotation not available	0.950
ENSMZEP00005003717	LOC101467688	ENSMZEP00005003717	ENSMZEP00005004915	Uncharacterized protein.	Ribosomal protein S19.	0.976
ENSMZEP00005003717	LOC101479652	ENSMZEP00005003717	ENSMZEP00005004086	Uncharacterized protein.	40S ribosomal protein SA; Required for the assembly and/or stability of the 40S ribosomal subunit. Required for the processing of the 20S rRNA- precursor to mature 18S rRNA in a late step of the maturation of 40S ribosomal subunits. Also functions as a cell surface receptor for laminin. Plays a role in cell adhesion to the basement membrane and in the consequent activation of signaling transduction pathways. May play a role in cell fate determination and tissue morphogenesis. Belongs to the universal ribosomal protein uS2 family.	0.993
ENSMZEP00005003717	LOC101480409	ENSMZEP00005003717	ENSMZEP00005018242	Uncharacterized protein.	Ribosomal protein S17.	0.939
ENSMZEP00005003717	LOC112432562	ENSMZEP00005003717	ENSMZEP00005029716	Uncharacterized protein.	Ribosomal_S10 domain-containing protein.	0.950
ENSMZEP00005003717	RPS19	ENSMZEP00005003717	ENSMZEP00005035612	Uncharacterized protein.	Ribosomal protein S19.	0.976
ENSMZEP00005003717	RPS20	ENSMZEP00005003717	ENSMZEP00005005123	Uncharacterized protein.	Ribosomal protein S20.	0.950
ENSMZEP00005003717	Rps26	ENSMZEP00005003717	ENSMZEP00005011521	Uncharacterized protein.	40S ribosomal protein S26; Belongs to the eukaryotic ribosomal protein eS26 family.	0.993
ENSMZEP00005003717	fau	ENSMZEP00005003717	ENSMZEP00005016095	Uncharacterized protein.	40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family.	0.999
ENSMZEP00005003717	mcts1	ENSMZEP00005003717	ENSMZEP00005010271	Uncharacterized protein.	Malignant T-cell-amplified sequence.	0.543
ENSMZEP00005003717	rps11	ENSMZEP00005003717	ENSMZEP00005030279	Uncharacterized protein.	Ribosomal protein S11; Belongs to the universal ribosomal protein uS17 family.	0.994
ENSMZEP00005003717	rps13	ENSMZEP00005003717	ENSMZEP00005016086	Uncharacterized protein.	Ribosomal protein S13; Belongs to the universal ribosomal protein uS15 family.	0.993
ENSMZEP00005003717	rps15	ENSMZEP00005003717	ENSMZEP00005005033	Uncharacterized protein.	Ribosomal protein S15; Belongs to the universal ribosomal protein uS19 family.	0.994
ENSMZEP00005003717	rps16	ENSMZEP00005003717	ENSMZEP00005002493	Uncharacterized protein.	Ribosomal protein S16; Belongs to the universal ribosomal protein uS9 family.	0.904
ENSMZEP00005003717	rps17	ENSMZEP00005003717	ENSMZEP00005030588	Uncharacterized protein.	Uncharacterized protein.	0.939
ENSMZEP00005003717	rps18	ENSMZEP00005003717	ENSMZEP00005036117	Uncharacterized protein.	Ribosomal protein S18; Belongs to the universal ribosomal protein uS13 family.	0.994
ENSMZEP00005003717	rps2	ENSMZEP00005003717	ENSMZEP00005000890	Uncharacterized protein.	Ribosomal protein S2; Belongs to the universal ribosomal protein uS5 family.	0.994
ENSMZEP00005003717	rps23	ENSMZEP00005003717	ENSMZEP00005021500	Uncharacterized protein.	Ribosomal protein S23; Belongs to the universal ribosomal protein uS12 family.	0.994